SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001300943
Gene Symbol: C11orf30

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr11:g.76550118C>T COSM1704404 YULAPE [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1253 cccagccCTTCTCag AGAGAAGA m6b Disrupted HHSJI_495_Peak28233|22|0.2747|4|AK125114|C11orf30
hsa-miR-3154 cccagCCCTTCTcag CAGAAGGG m7b Disrupted HHSJI_495_Peak28233|22|0.2747|4|AK125114|C11orf30
hsa-miR-4446-3p ccCAGCCCTtctcag CAGGGCUG m7b (m7b->m6b) HHSJI_495_Peak28233|22|0.2747|4|AK125114|C11orf30
hsa-miR-4492 cCCAGCCCttctcag GGGGCUGG m7b Disrupted HHSJI_495_Peak28233|22|0.2747|4|AK125114|C11orf30
hsa-miR-4498 cCCAGCCCttctcag UGGGCUGG m7b Disrupted HHSJI_495_Peak28233|22|0.2747|4|AK125114|C11orf30
hsa-miR-5001-5p cCCAGCCCTtctcag AGGGCUGG m8a (m8a->m7a) HHSJI_495_Peak28233|22|0.2747|4|AK125114|C11orf30
hsa-miR-539-5p cccagccTTTCTCag GGAGAAAU m6b Created HHSJI_495_Peak28233|22|0.2747|4|AK125114|C11orf30
hsa-miR-5787 CCCAGCCCttctcag GGGCUGGG m8a Disrupted HHSJI_495_Peak28233|22|0.2747|4|AK125114|C11orf30
hsa-miR-6770-5p cccagcCCTTCTCAg UGAGAAGG m8a Disrupted HHSJI_495_Peak28233|22|0.2747|4|AK125114|C11orf30
hsa-miR-1253 cccagccCTTCTCag AGAGAAGA m6b Disrupted HHSJI_496_Peak28233|22|0.2747|4|AK125114|C11orf30
hsa-miR-3154 cccagCCCTTCTcag CAGAAGGG m7b Disrupted HHSJI_496_Peak28233|22|0.2747|4|AK125114|C11orf30
hsa-miR-4446-3p ccCAGCCCTtctcag CAGGGCUG m7b (m7b->m6b) HHSJI_496_Peak28233|22|0.2747|4|AK125114|C11orf30
hsa-miR-4492 cCCAGCCCttctcag GGGGCUGG m7b Disrupted HHSJI_496_Peak28233|22|0.2747|4|AK125114|C11orf30
hsa-miR-4498 cCCAGCCCttctcag UGGGCUGG m7b Disrupted HHSJI_496_Peak28233|22|0.2747|4|AK125114|C11orf30
hsa-miR-5001-5p cCCAGCCCTtctcag AGGGCUGG m8a (m8a->m7a) HHSJI_496_Peak28233|22|0.2747|4|AK125114|C11orf30
hsa-miR-539-5p cccagccTTTCTCag GGAGAAAU m6b Created HHSJI_496_Peak28233|22|0.2747|4|AK125114|C11orf30
hsa-miR-5787 CCCAGCCCttctcag GGGCUGGG m8a Disrupted HHSJI_496_Peak28233|22|0.2747|4|AK125114|C11orf30
hsa-miR-6770-5p cccagcCCTTCTCAg UGAGAAGG m8a Disrupted HHSJI_496_Peak28233|22|0.2747|4|AK125114|C11orf30

Mutation Mutation ID Sample Name Cancer Type
chr11:g.76550100A>G COSM932084 TCGA-BS-A0UJ-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1470 aCGGAGGGtggaact GCCCUCCG m7b Created HHSJI_495_Peak28233|22|0.2747|4|AK125114|C11orf30
hsa-miR-5196-3p acgGAGGATGgaact UCAUCCUC m7b Disrupted HHSJI_495_Peak28233|22|0.2747|4|AK125114|C11orf30
hsa-miR-6865-3p acgGAGGGTGgaact ACACCCUC m7b Created HHSJI_495_Peak28233|22|0.2747|4|AK125114|C11orf30
hsa-miR-1470 aCGGAGGGtggaact GCCCUCCG m7b Created HHSJI_496_Peak28233|22|0.2747|4|AK125114|C11orf30
hsa-miR-5196-3p acgGAGGATGgaact UCAUCCUC m7b Disrupted HHSJI_496_Peak28233|22|0.2747|4|AK125114|C11orf30
hsa-miR-6865-3p acgGAGGGTGgaact ACACCCUC m7b Created HHSJI_496_Peak28233|22|0.2747|4|AK125114|C11orf30

Mutation Mutation ID Sample Name Cancer Type
chr11:g.76550078G>A COSM467429 TCGA-BP-5001-01 [kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-370-3p ggAGCAGGacataga GCCUGCUG m6b Disrupted HHSJI_495_Peak28233|22|0.2747|4|AK125114|C11orf30
hsa-miR-6828-3p gGAGCAGAacataga AUCUGCUC m7b Created HHSJI_495_Peak28233|22|0.2747|4|AK125114|C11orf30
hsa-miR-6893-3p ggAGCAGGacataga CCCUGCUG m6b Disrupted HHSJI_495_Peak28233|22|0.2747|4|AK125114|C11orf30
hsa-miR-370-3p ggAGCAGGacataga GCCUGCUG m6b Disrupted HHSJI_496_Peak28233|22|0.2747|4|AK125114|C11orf30
hsa-miR-6828-3p gGAGCAGAacataga AUCUGCUC m7b Created HHSJI_496_Peak28233|22|0.2747|4|AK125114|C11orf30
hsa-miR-6893-3p ggAGCAGGacataga CCCUGCUG m6b Disrupted HHSJI_496_Peak28233|22|0.2747|4|AK125114|C11orf30

Mutation Mutation ID Sample Name Cancer Type
chr11:g.76550069A>G COSM3810450 TCGA-AN-A0AK-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1273g-3p gacaGCAGTGGagca ACCACUGC m7b Created HHSJI_495_Peak28233|22|0.2747|4|AK125114|C11orf30
hsa-miR-136-5p gacagcAATGGAGca ACUCCAUU m7b Disrupted HHSJI_495_Peak28233|22|0.2747|4|AK125114|C11orf30
hsa-miR-181a-2-3p gacagCAGTGGagca ACCACUGA m6b Created HHSJI_495_Peak28233|22|0.2747|4|AK125114|C11orf30
hsa-miR-6509-3p gacagCAGTGGAgca UUCCACUG m7b Created HHSJI_495_Peak28233|22|0.2747|4|AK125114|C11orf30
hsa-miR-6890-3p gacaGCAGTGGagca CCACUGCC m7a Created HHSJI_495_Peak28233|22|0.2747|4|AK125114|C11orf30
hsa-miR-1273g-3p gacaGCAGTGGagca ACCACUGC m7b Created HHSJI_496_Peak28233|22|0.2747|4|AK125114|C11orf30
hsa-miR-136-5p gacagcAATGGAGca ACUCCAUU m7b Disrupted HHSJI_496_Peak28233|22|0.2747|4|AK125114|C11orf30
hsa-miR-181a-2-3p gacagCAGTGGagca ACCACUGA m6b Created HHSJI_496_Peak28233|22|0.2747|4|AK125114|C11orf30
hsa-miR-6509-3p gacagCAGTGGAgca UUCCACUG m7b Created HHSJI_496_Peak28233|22|0.2747|4|AK125114|C11orf30
hsa-miR-6890-3p gacaGCAGTGGagca CCACUGCC m7a Created HHSJI_496_Peak28233|22|0.2747|4|AK125114|C11orf30

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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