SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001300728
Gene Symbol: ATMIN

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr16:g.81043531C>T COSM5001896 PDA_074 [pancreas][NS][carcinoma][ductal_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-8080 cttaaTGTCCTTgtc GAAGGACA m7b Created HPKMB_3044_G3455.1_81077138
hsa-miR-4761-3p cttaATGCCCTtgtc GAGGGCAU m7b Disrupted HPKMB_3044_G3455.1_81077138

Mutation Mutation ID Sample Name Cancer Type
chr16:g.81043531C>A COSM973993 TCGA-B5-A11E-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-624-3p cttaatgACCTTGTc CACAAGGU m7b Created HPKMB_3044_G3455.1_81077138
hsa-miR-4761-3p cttaATGCCCTtgtc GAGGGCAU m7b Disrupted HPKMB_3044_G3455.1_81077138
hsa-miR-3974 cttaaTGACCTTgtc AAAGGUCA m7b Created HPKMB_3044_G3455.1_81077138

Mutation Mutation ID Sample Name Cancer Type
chr16:g.81043524C>A COSM973992 TCGA-B5-A11E-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-92b-3p ctGTGCAATtaatgc UAUUGCAC m7b (m6b->m7b) HPKMB_3044_G3455.1_81077138
hsa-miR-92a-3p ctGTGCAATtaatgc UAUUGCAC m7b (m6b->m7b) HPKMB_3044_G3455.1_81077138
hsa-miR-367-3p ctGTGCAATTaatgc AAUUGCAC m8a Created HPKMB_3044_G3455.1_81077138
hsa-miR-363-3p ctGTGCAATTaatgc AAUUGCAC m8a Created HPKMB_3044_G3455.1_81077138
hsa-miR-32-5p ctGTGCAATtaatgc UAUUGCAC m7b (m6b->m7b) HPKMB_3044_G3455.1_81077138
hsa-miR-302f ctgtGCAATTAatgc UAAUUGCU m7a Created HPKMB_3044_G3455.1_81077138
hsa-miR-302e ctgtGCACTTAatgc UAAGUGCU m7a Disrupted HPKMB_3044_G3455.1_81077138
hsa-miR-302d-3p ctgtGCACTTAatgc UAAGUGCU m7a Disrupted HPKMB_3044_G3455.1_81077138
hsa-miR-302c-3p ctgtGCACTTAatgc UAAGUGCU m7a Disrupted HPKMB_3044_G3455.1_81077138
hsa-miR-302b-3p ctgtGCACTTAatgc UAAGUGCU m7a Disrupted HPKMB_3044_G3455.1_81077138
hsa-miR-302a-3p ctgtGCACTTAatgc UAAGUGCU m7a Disrupted HPKMB_3044_G3455.1_81077138
hsa-miR-25-3p ctGTGCAATtaatgc CAUUGCAC m7b (m6b->m7b) HPKMB_3044_G3455.1_81077138
hsa-miR-519a-3p ctgTGCACTTaatgc AAAGUGCA m7b Disrupted HPKMB_3044_G3455.1_81077138
hsa-miR-520e ctgtGCACTTaatgc AAAGUGCU m6b Disrupted HPKMB_3044_G3455.1_81077138
hsa-miR-520d-3p ctgtGCACTTaatgc AAAGUGCU m6b Disrupted HPKMB_3044_G3455.1_81077138
hsa-miR-520c-3p ctgtGCACTTaatgc AAAGUGCU m6b Disrupted HPKMB_3044_G3455.1_81077138
hsa-miR-520b ctgtGCACTTaatgc AAAGUGCU m6b Disrupted HPKMB_3044_G3455.1_81077138
hsa-miR-520a-3p ctgtGCACTTaatgc AAAGUGCU m6b Disrupted HPKMB_3044_G3455.1_81077138
hsa-miR-519c-3p ctgTGCACTTaatgc AAAGUGCA m7b Disrupted HPKMB_3044_G3455.1_81077138
hsa-miR-519b-3p ctgTGCACTTaatgc AAAGUGCA m7b Disrupted HPKMB_3044_G3455.1_81077138
hsa-miR-373-3p ctgtGCACTTaatgc GAAGUGCU m6b Disrupted HPKMB_3044_G3455.1_81077138
hsa-miR-372-3p ctgtGCACTTaatgc AAAGUGCU m6b Disrupted HPKMB_3044_G3455.1_81077138

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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