SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001297757
Gene Symbol: HELQ
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr4:g.83453793G>A COSM734444 TCGA-18-3409-01 [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6751-3p tttGCTCAGaaagta ACUGAGCC m6b Created HPTK7_5712_G8558.1_84374950
hsa-miR-615-3p tttGCTCGGAaagta UCCGAGCC m7a Disrupted HPTK7_5712_G8558.1_84374950
hsa-miR-4762-3p tttgcTCAGAAagta CUUCUGAU m6b Created HPTK7_5712_G8558.1_84374950
hsa-miR-4303 tttGCTCAGAAagta UUCUGAGC m8a Created HPTK7_5712_G8558.1_84374950
hsa-miR-3124-3p tttgctcGGAAAGTa ACUUUCCU m7a Disrupted HPTK7_5712_G8558.1_84374950
hsa-miR-1199-5p tttGCTCAGaaagta CCUGAGCC m6b Created HPTK7_5712_G8558.1_84374950

Mutation Mutation ID Sample Name Cancer Type
chr4:g.83453792G>A COSM734446 TCGA-18-3409-01 [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-615-3p ttGCTCGGAaagtat UCCGAGCC m7a (m7a->m6a) HPTK7_5712_G8558.1_84374950
hsa-miR-5003-3p ttgctcGAAAAGTAt UACUUUUC m8a Created HPTK7_5712_G8558.1_84374950
hsa-miR-3124-3p ttgctcGGAAAGTat ACUUUCCU m7a Disrupted HPTK7_5712_G8558.1_84374950

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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