SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001288760
Gene Symbol: ZNF180

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr19:g.44476460A>G COSM3938167 ESCC-190T [oesophagus][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-7705 aatAGCTATaaactt AAUAGCUC m6b Disrupted HPRO7_1567_G2487.1_44980659

Mutation Mutation ID Sample Name Cancer Type
chr19:g.44476457A>C COSM3290404 HCC2998 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-595 agctatACACTTatt GAAGUGUG m6b Created HPRO7_1567_G2487.1_44980659

Mutation Mutation ID Sample Name Cancer Type
chr19:g.44476434C>G COSM566918 TCGA-05-5715-01 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-219a-1-3p ggCAACTCatactga AGAGUUGA m6b Disrupted HPRO7_1567_G2487.1_44980659
hsa-miR-5094 ggcaACTGATactga AAUCAGUG m6b Created HPRO7_1567_G2487.1_44980659

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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