SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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Transcript ID: | NM_001288760 |
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Gene Symbol: | ZNF180 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
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chr19:g.44477399C>T | COSM3823368 | TCGA-AC-A23H-01 | [breast][NS][carcinoma][NS] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-1252-5p | gggaaaTCCTTCagc | AGAAGGAA | m6b | Disrupted | HHKTB_2047_NM_013256|1364|1403|42.681562393814|0.398452720804234 |
hsa-miR-3167 | ggGAAATCCTtcagc | AGGAUUUC | m8a | Disrupted | HHKTB_2047_NM_013256|1364|1403|42.681562393814|0.398452720804234 |
hsa-miR-3185 | gggaaaTTCTTCagc | AGAAGAAG | m6b | Created | HHKTB_2047_NM_013256|1364|1403|42.681562393814|0.398452720804234 |
hsa-miR-541-5p | gggaAATCCTTcagc | AAAGGAUU | m7b | Disrupted | HHKTB_2047_NM_013256|1364|1403|42.681562393814|0.398452720804234 |
hsa-miR-6507-5p | gggaaATTCTTCagc | GAAGAAUA | m7a | Created | HHKTB_2047_NM_013256|1364|1403|42.681562393814|0.398452720804234 |
hsa-miR-876-5p | ggGAAATCCttcagc | UGGAUUUC | m7b | (m7b->m6b) | HHKTB_2047_NM_013256|1364|1403|42.681562393814|0.398452720804234 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr19:g.44477398C>T | COSM3892816 | TCGA-EE-A3J7-06 | [skin][NS][malignant_melanoma][NS] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-1252-5p | ggaaaTCCTTCagct | AGAAGGAA | m6b | Disrupted | HHKTB_2047_NM_013256|1364|1403|42.681562393814|0.398452720804234 |
hsa-miR-3167 | gGAAATCCTtcagct | AGGAUUUC | m8a | (m8a->m7a) | HHKTB_2047_NM_013256|1364|1403|42.681562393814|0.398452720804234 |
hsa-miR-4766-5p | ggaaatCTTTCAGct | UCUGAAAG | m7b | Created | HHKTB_2047_NM_013256|1364|1403|42.681562393814|0.398452720804234 |
hsa-miR-541-5p | ggaAATCCTTcagct | AAAGGAUU | m7b | Disrupted | HHKTB_2047_NM_013256|1364|1403|42.681562393814|0.398452720804234 |
hsa-miR-876-5p | gGAAATCCttcagct | UGGAUUUC | m7b | Disrupted | HHKTB_2047_NM_013256|1364|1403|42.681562393814|0.398452720804234 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr19:g.44477383G>A | COSM1394472 | TCGA-A6-5661-01 | [large_intestine][colon][carcinoma][adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-576-3p | ggagctCACATCTTg | AAGAUGUG | m8a | Created | HHKTB_2047_NM_013256|1364|1403|42.681562393814|0.398452720804234 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr19:g.44477363G>T | COSM190644 | TCGA-AA-3977-01 | [large_intestine][colon][carcinoma][adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-101-5p | catcaGATAACTcac | CAGUUAUC | m7b | Created | HHKTB_2047_NM_013256|1364|1403|42.681562393814|0.398452720804234 |
hsa-miR-146a-3p | caTCAGAGaactcac | CCUCUGAA | m6b | Disrupted | HHKTB_2047_NM_013256|1364|1403|42.681562393814|0.398452720804234 |
hsa-miR-2117 | catcAGAGAACtcac | UGUUCUCU | m7b | Disrupted | HHKTB_2047_NM_013256|1364|1403|42.681562393814|0.398452720804234 |
hsa-miR-301a-5p | caTCAGAGaactcac | GCUCUGAC | m6b | Disrupted | HHKTB_2047_NM_013256|1364|1403|42.681562393814|0.398452720804234 |
hsa-miR-301b-5p | caTCAGAGaactcac | GCUCUGAC | m6b | Disrupted | HHKTB_2047_NM_013256|1364|1403|42.681562393814|0.398452720804234 |
hsa-miR-3168 | catcagAGAACTCac | GAGUUCUA | m7a | Disrupted | HHKTB_2047_NM_013256|1364|1403|42.681562393814|0.398452720804234 |
hsa-miR-3191-5p | catCAGAGAactcac | CUCUCUGG | m6b | Disrupted | HHKTB_2047_NM_013256|1364|1403|42.681562393814|0.398452720804234 |
hsa-miR-3192-3p | cATCAGAGaactcac | CUCUGAUC | m7a | Disrupted | HHKTB_2047_NM_013256|1364|1403|42.681562393814|0.398452720804234 |
hsa-miR-3921 | caTCAGAGAactcac | UCUCUGAG | m7a | (m7a->m6a) | HHKTB_2047_NM_013256|1364|1403|42.681562393814|0.398452720804234 |
hsa-miR-4424 | catcagaTAACTCac | AGAGUUAA | m6b | Created | HHKTB_2047_NM_013256|1364|1403|42.681562393814|0.398452720804234 |
hsa-miR-4653-5p | caTCAGAGAactcac | UCUCUGAG | m7a | (m7a->m6a) | HHKTB_2047_NM_013256|1364|1403|42.681562393814|0.398452720804234 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr19:g.44477347G>T | COSM4743121 | T578 | [large_intestine][caecum][carcinoma][adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-4713-5p | cagGGGAGAAacctt | UUCUCCCA | m7a | Disrupted | HHKTB_3858_NM_013256|1404|1443|31.0788075683112|0.398452720804234 |
hsa-miR-629-3p | cagGGGAGAAacctt | GUUCUCCC | m7b | Disrupted | HHKTB_3858_NM_013256|1404|1443|31.0788075683112|0.398452720804234 |
hsa-miR-6867-3p | cagGGGAGAaacctt | CUCUCCCU | m6b | Disrupted | HHKTB_3858_NM_013256|1404|1443|31.0788075683112|0.398452720804234 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr19:g.44477332T>C | COSM190643 | TCGA-AA-A00E-01 | [large_intestine][colon][carcinoma][adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-181a-5p | aTGAATGTagtgaat | AACAUUCA | m7b | Disrupted | HHKTB_3858_NM_013256|1404|1443|31.0788075683112|0.398452720804234 |
hsa-miR-181b-2-3p | atgaatgCAGTGAat | CUCACUGA | m6b | Created | HHKTB_3858_NM_013256|1404|1443|31.0788075683112|0.398452720804234 |
hsa-miR-181b-3p | atgaatgCAGTGAat | CUCACUGA | m6b | Created | HHKTB_3858_NM_013256|1404|1443|31.0788075683112|0.398452720804234 |
hsa-miR-181b-5p | aTGAATGTagtgaat | AACAUUCA | m7b | Disrupted | HHKTB_3858_NM_013256|1404|1443|31.0788075683112|0.398452720804234 |
hsa-miR-181c-5p | aTGAATGTagtgaat | AACAUUCA | m7b | Disrupted | HHKTB_3858_NM_013256|1404|1443|31.0788075683112|0.398452720804234 |
hsa-miR-181d-5p | aTGAATGTagtgaat | AACAUUCA | m7b | Disrupted | HHKTB_3858_NM_013256|1404|1443|31.0788075683112|0.398452720804234 |
hsa-miR-20a-3p | atgAATGCAGTgaat | ACUGCAUU | m8a | Created | HHKTB_3858_NM_013256|1404|1443|31.0788075683112|0.398452720804234 |
hsa-miR-217 | atgaATGCAGTgaat | UACUGCAU | m7b | Created | HHKTB_3858_NM_013256|1404|1443|31.0788075683112|0.398452720804234 |
hsa-miR-4262 | aTGAATGTagtgaat | GACAUUCA | m7b | Disrupted | HHKTB_3858_NM_013256|1404|1443|31.0788075683112|0.398452720804234 |
hsa-miR-4418 | atgaaTGCAGTGaat | CACUGCAG | m7a | Created | HHKTB_3858_NM_013256|1404|1443|31.0788075683112|0.398452720804234 |
hsa-miR-4420 | atgaatgCAGTGAat | GUCACUGA | m6b | Created | HHKTB_3858_NM_013256|1404|1443|31.0788075683112|0.398452720804234 |
hsa-miR-4999-3p | atgaatGTAGTGAat | UCACUACC | m7a | Disrupted | HHKTB_3858_NM_013256|1404|1443|31.0788075683112|0.398452720804234 |
hsa-miR-6807-3p | atgaATGCAGTGaat | CACUGCAU | m8a | Created | HHKTB_3858_NM_013256|1404|1443|31.0788075683112|0.398452720804234 |
hsa-miR-6890-3p | atgaatGCAGTGaat | CCACUGCC | m6b | Created | HHKTB_3858_NM_013256|1404|1443|31.0788075683112|0.398452720804234 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr19:g.44477330G>C | COSM213749 | SA106 | [breast][NS][carcinoma][basal_(triple-negative)_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-222-5p | gaatgTACTGAatgt | CUCAGUAG | m6b | Created | HHKTB_3858_NM_013256|1404|1443|31.0788075683112|0.398452720804234 |
hsa-miR-4999-3p | gaatGTAGTGAatgt | UCACUACC | m7a | Disrupted | HHKTB_3858_NM_013256|1404|1443|31.0788075683112|0.398452720804234 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr19:g.44477328G>A | COSM1582415 | 2000362 | [stomach][NS][carcinoma][intestinal_adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-181a-5p | atgtagTGAATGTgg | AACAUUCA | m7b | Disrupted | HHKTB_3858_NM_013256|1404|1443|31.0788075683112|0.398452720804234 |
hsa-miR-181b-5p | atgtagTGAATGTgg | AACAUUCA | m7b | Disrupted | HHKTB_3858_NM_013256|1404|1443|31.0788075683112|0.398452720804234 |
hsa-miR-181c-5p | atgtagTGAATGTgg | AACAUUCA | m7b | Disrupted | HHKTB_3858_NM_013256|1404|1443|31.0788075683112|0.398452720804234 |
hsa-miR-181d-5p | atgtagTGAATGTgg | AACAUUCA | m7b | Disrupted | HHKTB_3858_NM_013256|1404|1443|31.0788075683112|0.398452720804234 |
hsa-miR-4262 | atgtagTGAATGTgg | GACAUUCA | m7b | Disrupted | HHKTB_3858_NM_013256|1404|1443|31.0788075683112|0.398452720804234 |
hsa-miR-4699-3p | atgtAGTAAATgtgg | AAUUUACU | m7b | Created | HHKTB_3858_NM_013256|1404|1443|31.0788075683112|0.398452720804234 |
hsa-miR-4999-3p | atGTAGTGAatgtgg | UCACUACC | m7a | (m7a->m6a) | HHKTB_3858_NM_013256|1404|1443|31.0788075683112|0.398452720804234 |