SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001282962
Gene Symbol: HJURP

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr2:g.233841921A>G COSM141031 1604875 [upper_aerodigestive_tract][mouth][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-9-5p cACCAAAGcgttcat UCUUUGGU m7b Created HPHES_4860_G6446.1_234750572

Mutation Mutation ID Sample Name Cancer Type
chr2:g.233841910G>A COSM4092560 TCGA-BR-4201-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-557 tcatcaTGCAAAact GUUUGCAC m6b Disrupted HPHES_4860_G6446.1_234750572
hsa-miR-6797-3p tcaTCATGCAaaact UGCAUGAC m7a Disrupted HPHES_4860_G6446.1_234750572
hsa-miR-675-3p tcatCATACAaaact CUGUAUGC m6b Created HPHES_4860_G6446.1_234750572
hsa-miR-6076 tcaTCATGCaaaact AGCAUGAC m6b Disrupted HPHES_4860_G6446.1_234750572
hsa-miR-5011-3p tcatCATGCAaaact GUGCAUGG m6b Disrupted HPHES_4860_G6446.1_234750572
hsa-miR-4666b tcatCATGCAAaact UUGCAUGU m7a Disrupted HPHES_4860_G6446.1_234750572
hsa-miR-3680-3p tcatcATGCAAAAct UUUUGCAU m8a Disrupted HPHES_4860_G6446.1_234750572
hsa-miR-3149 tcatCATACAAAact UUUGUAUG m8a Created HPHES_4860_G6446.1_234750572
hsa-miR-297 tcatCATACAaaact AUGUAUGU m6b Created HPHES_4860_G6446.1_234750572
hsa-miR-19b-2-5p tcatcatGCAAAACt AGUUUUGC m7b Disrupted HPHES_4860_G6446.1_234750572
hsa-miR-19b-1-5p tcatcatGCAAAACt AGUUUUGC m7b Disrupted HPHES_4860_G6446.1_234750572
hsa-miR-19a-5p tcatcatGCAAAACt AGUUUUGC m7b Disrupted HPHES_4860_G6446.1_234750572

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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