SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: NM_001282761
Gene Symbol: CFAP36

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr2:g.55535841A>C COSN1082829 TCGA-D1-A16X-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-2053 ctATTAACAtttata GUGUUAAU m7b (m6b->m7b) HPKTB_5816_G7322.1_55762974
hsa-miR-3606-3p ctattaAAATTTata AAAAUUUC m6b Disrupted HPKTB_5816_G7322.1_55762974
hsa-miR-569 ctATTAACatttata AGUUAAUG m6b Created HPKTB_5816_G7322.1_55762974
hsa-miR-590-3p ctatTAAAATTtata UAAUUUUA m7b Disrupted HPKTB_5816_G7322.1_55762974

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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