SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001282425
Gene Symbol: GNA13
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr17:g.65014555G>A COSM982988 TCGA-B5-A0JV-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-487a-5p aATAACCAggttttc GUGGUUAU m7b Created HPTK7_3470_G5046.1_63010667
hsa-miR-487b-5p aATAACCAggttttc GUGGUUAU m7b Created HPTK7_3470_G5046.1_63010667
hsa-miR-490-3p aataaCCAGGTTttc CAACCUGG m7b Created HPTK7_3470_G5046.1_63010667
hsa-miR-548as-3p aataaccGGGTTTTc UAAAACCC m7b Disrupted HPTK7_3470_G5046.1_63010667

Mutation Mutation ID Sample Name Cancer Type
chr17:g.65014543A>T COSM1159758 675 [haematopoietic_and_lymphoid_tissue][NS][lymphoid_neoplasm][Burkitt_lymphoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4728-3p tTCAGCATtgtctcc CAUGCUGA m7b Created HPTK7_3470_G5046.1_63010667

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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