SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001282231
Gene Symbol: ARMCX2

Somatic mutations that impact miRNA target sites

Mutation Mutation ID Sample Name Cancer Type
chrX:g.101655796TA>A COSM4663435 T2944 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chrX:g.101655796A>C COSM2150877 TCGA-06-0213-01 [central_nervous_system][brain][glioma][astrocytoma_Grade_IV]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-651-3p ctttTTTCCTTatgc AAAGGAAA m7b Created HPHES_9078_G12094.1_100910776
hsa-miR-3148 ctTTTTTCCttatgc UGGAAAAA m7b (m6b->m7b) HPHES_9078_G12094.1_100910776

Mutation Mutation ID Sample Name Cancer Type
chrX:g.101655791T>C COSM4167360 2113174 [meninges][NS][meningioma][haemangiopericytic]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-130b-3p ttacttaTGCACTac CAGUGCAA m6b Disrupted HPHES_9078_G12094.1_100910776
hsa-miR-301a-3p ttacttaTGCACTac CAGUGCAA m6b Disrupted HPHES_9078_G12094.1_100910776
hsa-miR-301b-3p ttacttaTGCACTac CAGUGCAA m6b Disrupted HPHES_9078_G12094.1_100910776
hsa-miR-3666 ttacttaTGCACTac CAGUGCAA m6b Disrupted HPHES_9078_G12094.1_100910776
hsa-miR-4295 ttacttaTGCACTac CAGUGCAA m6b Disrupted HPHES_9078_G12094.1_100910776
hsa-miR-4671-3p ttacttaTGCACTAc UUAGUGCA m7b Disrupted HPHES_9078_G12094.1_100910776
hsa-miR-130a-3p ttacttaTGCACTac CAGUGCAA m6b Disrupted HPHES_9078_G12094.1_100910776

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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