SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001278734
Gene Symbol: ZNF274
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr19:g.58212942C>T COSM4082365 TCGA-BR-4184-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-29a-3p acacTGGTGCTAagc UAGCACCA m8a Created HPHES_4060_G5369.1_58724305
hsa-miR-29b-3p acacTGGTGCTAagc UAGCACCA m8a Created HPHES_4060_G5369.1_58724305
hsa-miR-29c-3p acacTGGTGCTAagc UAGCACCA m8a Created HPHES_4060_G5369.1_58724305
hsa-miR-5682 acactGGTGCTAagc GUAGCACC m7b Created HPHES_4060_G5369.1_58724305
hsa-miR-585-5p acactgGTGCTAagc CUAGCACA m6b Created HPHES_4060_G5369.1_58724305
hsa-miR-6871-3p acactGGTGCTaagc CAGCACCC m6b Created HPHES_4060_G5369.1_58724305
hsa-miR-29a-3p acacTGGTGCTAagc UAGCACCA m8a Created HPHES_4060_G5369.1_58724305
hsa-miR-29b-3p acacTGGTGCTAagc UAGCACCA m8a Created HPHES_4060_G5369.1_58724305
hsa-miR-29c-3p acacTGGTGCTAagc UAGCACCA m8a Created HPHES_4060_G5369.1_58724305
hsa-miR-5682 acactGGTGCTAagc GUAGCACC m7b Created HPHES_4060_G5369.1_58724305
hsa-miR-585-5p acactgGTGCTAagc CUAGCACA m6b Created HPHES_4060_G5369.1_58724305
hsa-miR-6871-3p acactGGTGCTaagc CAGCACCC m6b Created HPHES_4060_G5369.1_58724305

Mutation Mutation ID Sample Name Cancer Type
chr19:g.58212931A>G COSM1590343 TCGA-B5-A11E-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1233-3p cctgAGGGCTCAcac UGAGCCCU m8a Created HPHES_4060_G5369.1_58724305
hsa-miR-4687-5p cctGAGGGCTcacac CAGCCCUC m7b Created HPHES_4060_G5369.1_58724305
hsa-miR-627-5p cctgagGACTCACac GUGAGUCU m7a Disrupted HPHES_4060_G5369.1_58724305
hsa-miR-6807-5p cctgagGGCTCACac GUGAGCCA m7a Created HPHES_4060_G5369.1_58724305
hsa-miR-937-5p cctgagGACTCACac GUGAGUCA m7a Disrupted HPHES_4060_G5369.1_58724305
hsa-miR-1233-3p cctgAGGGCTCAcac UGAGCCCU m8a Created HPHES_4060_G5369.1_58724305
hsa-miR-4687-5p cctGAGGGCTcacac CAGCCCUC m7b Created HPHES_4060_G5369.1_58724305
hsa-miR-627-5p cctgagGACTCACac GUGAGUCU m7a Disrupted HPHES_4060_G5369.1_58724305
hsa-miR-6807-5p cctgagGGCTCACac GUGAGCCA m7a Created HPHES_4060_G5369.1_58724305
hsa-miR-937-5p cctgagGACTCACac GUGAGUCA m7a Disrupted HPHES_4060_G5369.1_58724305

Mutation Mutation ID Sample Name Cancer Type
chr19:g.58212925C>T COSM1649512 TCGA-38-4631-01 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-125a-3p ccagCACCTGaggac ACAGGUGA m6b Disrupted HPHES_4060_G5369.1_58724305
hsa-miR-1266-5p ccagcaCCTGAGGac CCUCAGGG m7a Disrupted HPHES_4060_G5369.1_58724305
hsa-miR-302a-3p ccAGCACTTgaggac UAAGUGCU m7b (m6b->m7b) HPHES_4060_G5369.1_58724305
hsa-miR-302b-3p ccAGCACTTgaggac UAAGUGCU m7b (m6b->m7b) HPHES_4060_G5369.1_58724305
hsa-miR-302c-3p ccAGCACTTgaggac UAAGUGCU m7b (m6b->m7b) HPHES_4060_G5369.1_58724305
hsa-miR-302d-3p ccAGCACTTgaggac UAAGUGCU m7b (m6b->m7b) HPHES_4060_G5369.1_58724305
hsa-miR-302e ccAGCACTTgaggac UAAGUGCU m7b (m6b->m7b) HPHES_4060_G5369.1_58724305
hsa-miR-372-3p ccAGCACTTgaggac AAAGUGCU m7b (m6b->m7b) HPHES_4060_G5369.1_58724305
hsa-miR-373-3p ccAGCACTTgaggac GAAGUGCU m7b (m6b->m7b) HPHES_4060_G5369.1_58724305
hsa-miR-512-3p cCAGCACTTgaggac AAGUGCUG m8a (m7a->m8a) HPHES_4060_G5369.1_58724305
hsa-miR-520a-3p ccAGCACTTgaggac AAAGUGCU m7b (m6b->m7b) HPHES_4060_G5369.1_58724305
hsa-miR-520b ccAGCACTTgaggac AAAGUGCU m7b (m6b->m7b) HPHES_4060_G5369.1_58724305
hsa-miR-520c-3p ccAGCACTTgaggac AAAGUGCU m7b (m6b->m7b) HPHES_4060_G5369.1_58724305
hsa-miR-520d-3p ccAGCACTTgaggac AAAGUGCU m7b (m6b->m7b) HPHES_4060_G5369.1_58724305
hsa-miR-520e ccAGCACTTgaggac AAAGUGCU m7b (m6b->m7b) HPHES_4060_G5369.1_58724305
hsa-miR-764 ccaGCACCTGaggac GCAGGUGC m7b Disrupted HPHES_4060_G5369.1_58724305
hsa-miR-125a-3p ccagCACCTGaggac ACAGGUGA m6b Disrupted HPHES_4060_G5369.1_58724305
hsa-miR-1266-5p ccagcaCCTGAGGac CCUCAGGG m7a Disrupted HPHES_4060_G5369.1_58724305
hsa-miR-302a-3p ccAGCACTTgaggac UAAGUGCU m7b (m6b->m7b) HPHES_4060_G5369.1_58724305
hsa-miR-302b-3p ccAGCACTTgaggac UAAGUGCU m7b (m6b->m7b) HPHES_4060_G5369.1_58724305
hsa-miR-302c-3p ccAGCACTTgaggac UAAGUGCU m7b (m6b->m7b) HPHES_4060_G5369.1_58724305
hsa-miR-302d-3p ccAGCACTTgaggac UAAGUGCU m7b (m6b->m7b) HPHES_4060_G5369.1_58724305
hsa-miR-302e ccAGCACTTgaggac UAAGUGCU m7b (m6b->m7b) HPHES_4060_G5369.1_58724305
hsa-miR-372-3p ccAGCACTTgaggac AAAGUGCU m7b (m6b->m7b) HPHES_4060_G5369.1_58724305
hsa-miR-373-3p ccAGCACTTgaggac GAAGUGCU m7b (m6b->m7b) HPHES_4060_G5369.1_58724305
hsa-miR-512-3p cCAGCACTTgaggac AAGUGCUG m8a (m7a->m8a) HPHES_4060_G5369.1_58724305
hsa-miR-520a-3p ccAGCACTTgaggac AAAGUGCU m7b (m6b->m7b) HPHES_4060_G5369.1_58724305
hsa-miR-520b ccAGCACTTgaggac AAAGUGCU m7b (m6b->m7b) HPHES_4060_G5369.1_58724305
hsa-miR-520c-3p ccAGCACTTgaggac AAAGUGCU m7b (m6b->m7b) HPHES_4060_G5369.1_58724305
hsa-miR-520d-3p ccAGCACTTgaggac AAAGUGCU m7b (m6b->m7b) HPHES_4060_G5369.1_58724305
hsa-miR-520e ccAGCACTTgaggac AAAGUGCU m7b (m6b->m7b) HPHES_4060_G5369.1_58724305
hsa-miR-764 ccaGCACCTGaggac GCAGGUGC m7b Disrupted HPHES_4060_G5369.1_58724305

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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