SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001277058
Gene Symbol: ERCC6-PGBD3

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr10:g.49516264A>C COSM173913 TCGA-AG-A002-01 [large_intestine][rectum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-522-3p tgcaaACCATTTatt AAAAUGGU m7b Created HPTK7_1256_G1750.1_50724300
hsa-miR-5087 tgCAAACCatttatt GGGUUUGU m6b Created HPTK7_1256_G1750.1_50724300
hsa-miR-4694-3p tgcaaaCCATTTatt CAAAUGGA m6b Created HPTK7_1256_G1750.1_50724300
hsa-miR-224-3p tgcaaACCATTTatt AAAAUGGU m7b Created HPTK7_1256_G1750.1_50724300

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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