SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001260496
Gene Symbol: RDX
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr11:g.110229641A>T COSN4718688 tumor_4104893 [haematopoietic_and_lymphoid_tissue][NS][lymphoid_neoplasm][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-216a-5p aGAGATTAaaccaat UAAUCUCA m7a Disrupted HPKTB_2223_G2842.1_110100356
hsa-miR-299-5p agagatTAAACCAat UGGUUUAC m7a Disrupted HPKTB_2223_G2842.1_110100356
hsa-miR-29b-2-5p agagattAAACCAat CUGGUUUC m6b Disrupted HPKTB_2223_G2842.1_110100356
hsa-miR-487a-5p agagattTAACCAat GUGGUUAU m6b Created HPKTB_2223_G2842.1_110100356
hsa-miR-487b-5p agagattTAACCAat GUGGUUAU m6b Created HPKTB_2223_G2842.1_110100356

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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