SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001258282
Gene Symbol: LINGO2

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr9:g.28863688T>C COSN528118 TCGA-69-7765-01 [lung][right_upper_lobe][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6830-5p ggatTTCCTTGtgaa CCAAGGAA m7b Created HPHES_8502_G11336.1_28863682
hsa-miR-651-3p ggaTTTCCTTgtgaa AAAGGAAA m7b Created HPHES_8502_G11336.1_28863682
hsa-miR-624-3p ggatttCCTTGTGaa CACAAGGU m7a Created HPHES_8502_G11336.1_28863682
hsa-miR-513b-5p ggatttcCTTGTGAa UUCACAAG m7b Created HPHES_8502_G11336.1_28863682
hsa-miR-4719 ggatttcTTTGTGAa UCACAAAU m7a Disrupted HPHES_8502_G11336.1_28863682
hsa-miR-4457 ggatttCCTTGTGAa UCACAAGG m8a Created HPHES_8502_G11336.1_28863682
hsa-miR-125b-2-3p ggatttcCTTGTGAa UCACAAGU m7a Created HPHES_8502_G11336.1_28863682

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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