SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001256649
Gene Symbol: ZNF43

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr19:g.21808303C>T COSM4743821 T2938 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6858-5p cccaaTCCTCAaacc GUGAGGAG m6b Disrupted HPSD3_5178_G6878.1_21991097
hsa-miR-4709-3p cccaaTCTTCAAacc UUGAAGAG m7a Created HPSD3_5178_G6878.1_21991097
hsa-miR-4699-5p cccAATCTTCaaacc AGAAGAUU m7b Created HPSD3_5178_G6878.1_21991097
hsa-miR-4689 cccaaTCCTCAAacc UUGAGGAG m7a Disrupted HPSD3_5178_G6878.1_21991097
hsa-miR-1185-5p cccaATCCTCaaacc AGAGGAUA m6b Disrupted HPSD3_5178_G6878.1_21991097
hsa-miR-3915 cccaaTCCTCAAacc UUGAGGAA m7a Disrupted HPSD3_5178_G6878.1_21991097
hsa-miR-3679-5p cccaATCCTCAaacc UGAGGAUA m7a Disrupted HPSD3_5178_G6878.1_21991097
hsa-miR-3605-5p cccaATCCTCAaacc UGAGGAUG m7a Disrupted HPSD3_5178_G6878.1_21991097
hsa-miR-1224-5p cccaaTCCTCAaacc GUGAGGAC m6b Disrupted HPSD3_5178_G6878.1_21991097

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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