SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001256404
Gene Symbol: DENND2C

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr1:g.114625276T>C COSM4784888 TCGA-DM-A1D8-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-128-3p caaaaaaCACTGTGa UCACAGUG m7b Created HPHES_693_G919.1_115167905
hsa-miR-144-3p caaaaaATACTGTga UACAGUAU m7b Disrupted HPHES_693_G919.1_115167905
hsa-miR-16-1-3p caaaaAATACTGtga CCAGUAUU m7b Disrupted HPHES_693_G919.1_115167905
hsa-miR-216a-3p caaaaaaCACTGTGa UCACAGUG m7b Created HPHES_693_G919.1_115167905
hsa-miR-3681-3p caaaaaaCACTGTGa ACACAGUG m7b Created HPHES_693_G919.1_115167905
hsa-miR-128-3p caaaaaaCACTGTGa UCACAGUG m7b Created HPHES_693_G919.1_115167905
hsa-miR-144-3p caaaaaATACTGTga UACAGUAU m7b Disrupted HPHES_693_G919.1_115167905
hsa-miR-16-1-3p caaaaAATACTGtga CCAGUAUU m7b Disrupted HPHES_693_G919.1_115167905
hsa-miR-216a-3p caaaaaaCACTGTGa UCACAGUG m7b Created HPHES_693_G919.1_115167905
hsa-miR-3681-3p caaaaaaCACTGTGa ACACAGUG m7b Created HPHES_693_G919.1_115167905

Mutation Mutation ID Sample Name Cancer Type
chr1:g.114625276AT>T COSM1332902 TCGA-CM-4743-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-144-3p acaaaaaATACTGTga UACAGUAU m7b Disrupted HPHES_693_G919.1_115167905
hsa-miR-16-1-3p acaaaaAATACTGtga CCAGUAUU m7b Disrupted HPHES_693_G919.1_115167905

Mutation Mutation ID Sample Name Cancer Type
chr1:g.114625269A>G COSM1332900 TCGA-AZ-4315-01 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-128-3p tACTGTGAaaataac UCACAGUG m7a Disrupted HPHES_693_G919.1_115167905
hsa-miR-27a-3p tACTGTGAAaataac UUCACAGU m8a (m8a->m7a) HPHES_693_G919.1_115167905
hsa-miR-27b-3p tACTGTGAAaataac UUCACAGU m8a (m8a->m7a) HPHES_693_G919.1_115167905
hsa-miR-3692-3p tacTGTGGAAataac GUUCCACA m7b Created HPHES_693_G919.1_115167905
hsa-miR-5096 tactGTGAAAataac GUUUCACC m6b Disrupted HPHES_693_G919.1_115167905
hsa-miR-513a-5p taCTGTGAAaataac UUCACAGG m7a (m7a->m6a) HPHES_693_G919.1_115167905
hsa-miR-128-3p tACTGTGAaaataac UCACAGUG m7a Disrupted HPHES_693_G919.1_115167905
hsa-miR-27a-3p tACTGTGAAaataac UUCACAGU m8a (m8a->m7a) HPHES_693_G919.1_115167905
hsa-miR-27b-3p tACTGTGAAaataac UUCACAGU m8a (m8a->m7a) HPHES_693_G919.1_115167905
hsa-miR-3692-3p tacTGTGGAAataac GUUCCACA m7b Created HPHES_693_G919.1_115167905
hsa-miR-5096 tactGTGAAAataac GUUUCACC m6b Disrupted HPHES_693_G919.1_115167905
hsa-miR-513a-5p taCTGTGAAaataac UUCACAGG m7a (m7a->m6a) HPHES_693_G919.1_115167905

Mutation Mutation ID Sample Name Cancer Type
chr1:g.114625268A>G COSM3471621 TCGA-EB-A5UL-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1229-3p actGTGAGAataact CUCUCACC m6b Created HPHES_693_G919.1_115167905
hsa-miR-27a-3p ACTGTGAAaataact UUCACAGU m8a Disrupted HPHES_693_G919.1_115167905
hsa-miR-27b-3p ACTGTGAAaataact UUCACAGU m8a Disrupted HPHES_693_G919.1_115167905
hsa-miR-342-3p acTGTGAGAataact UCUCACAC m7a (m6a->m7a) HPHES_693_G919.1_115167905
hsa-miR-5096 actGTGAAAataact GUUUCACC m6b Disrupted HPHES_693_G919.1_115167905
hsa-miR-513a-5p aCTGTGAAaataact UUCACAGG m7a Disrupted HPHES_693_G919.1_115167905
hsa-miR-1229-3p actGTGAGAataact CUCUCACC m6b Created HPHES_693_G919.1_115167905
hsa-miR-27a-3p ACTGTGAAaataact UUCACAGU m8a Disrupted HPHES_693_G919.1_115167905
hsa-miR-27b-3p ACTGTGAAaataact UUCACAGU m8a Disrupted HPHES_693_G919.1_115167905
hsa-miR-342-3p acTGTGAGAataact UCUCACAC m7a (m6a->m7a) HPHES_693_G919.1_115167905
hsa-miR-5096 actGTGAAAataact GUUUCACC m6b Disrupted HPHES_693_G919.1_115167905
hsa-miR-513a-5p aCTGTGAAaataact UUCACAGG m7a Disrupted HPHES_693_G919.1_115167905

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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