SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001256280
Gene Symbol: ZNF26

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr12:g.133010985C>A COSM4761570 pfg122T [stomach][NS][carcinoma][intestinal_adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-580-5p aatAATCATTAtcaa UAAUGAUU m8a Created HPTK7_1979_G2861.1_133587579
hsa-miR-541-5p aatAATCCTTatcaa AAAGGAUU m7b Disrupted HPTK7_1979_G2861.1_133587579
hsa-miR-3161 aataatcCTTATCAa CUGAUAAG m7b Disrupted HPTK7_1979_G2861.1_133587579
hsa-miR-3159 aaTAATCCTtatcaa UAGGAUUA m7b (m7b->m6b) HPTK7_1979_G2861.1_133587579

Mutation Mutation ID Sample Name Cancer Type
chr12:g.133010983T>C COSM238479 WA50 [prostate][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-541-5p gaaatAATCCTTatc AAAGGAUU m7b Disrupted HPTK7_1979_G2861.1_133587579
hsa-miR-3159 gaaaTAATCCTtatc UAGGAUUA m7b Disrupted HPTK7_1979_G2861.1_133587579

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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