SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001252334
Gene Symbol: SH2D3C

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr9:g.127749381C>T COSM4905888 TCGA-EB-A41B-01 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-194-3p gcaccttCCCACTGc CCAGUGGG m7b Disrupted HPSD3_10477_G14206.1_130511655
hsa-miR-3978 gcacCTTTCCACtgc GUGGAAAG m8a Created HPSD3_10477_G14206.1_130511655
hsa-miR-4735-3p GCACCTTTccactgc AAAGGUGC m8a Created HPSD3_10477_G14206.1_130511655
hsa-miR-4747-5p gcaCCTTCCCactgc AGGGAAGG m7b Disrupted HPSD3_10477_G14206.1_130511655
hsa-miR-5196-5p gcaCCTTCCCactgc AGGGAAGG m7b Disrupted HPSD3_10477_G14206.1_130511655
hsa-miR-6730-5p gcACCTTTCcactgc AGAAAGGU m7b (m6b->m7b) HPSD3_10477_G14206.1_130511655
hsa-miR-194-3p gcaccttCCCACTGc CCAGUGGG m7b Disrupted HPSD3_10477_G14206.1_130511655
hsa-miR-3978 gcacCTTTCCACtgc GUGGAAAG m8a Created HPSD3_10477_G14206.1_130511655
hsa-miR-4735-3p GCACCTTTccactgc AAAGGUGC m8a Created HPSD3_10477_G14206.1_130511655
hsa-miR-4747-5p gcaCCTTCCCactgc AGGGAAGG m7b Disrupted HPSD3_10477_G14206.1_130511655
hsa-miR-5196-5p gcaCCTTCCCactgc AGGGAAGG m7b Disrupted HPSD3_10477_G14206.1_130511655
hsa-miR-6730-5p gcACCTTTCcactgc AGAAAGGU m7b (m6b->m7b) HPSD3_10477_G14206.1_130511655
hsa-miR-194-3p gcaccttCCCACTGc CCAGUGGG m7b Disrupted HPSD3_10477_G14206.1_130511655
hsa-miR-3978 gcacCTTTCCACtgc GUGGAAAG m8a Created HPSD3_10477_G14206.1_130511655
hsa-miR-4735-3p GCACCTTTccactgc AAAGGUGC m8a Created HPSD3_10477_G14206.1_130511655
hsa-miR-4747-5p gcaCCTTCCCactgc AGGGAAGG m7b Disrupted HPSD3_10477_G14206.1_130511655
hsa-miR-5196-5p gcaCCTTCCCactgc AGGGAAGG m7b Disrupted HPSD3_10477_G14206.1_130511655
hsa-miR-6730-5p gcACCTTTCcactgc AGAAAGGU m7b (m6b->m7b) HPSD3_10477_G14206.1_130511655
hsa-miR-194-3p gcaccttCCCACTGc CCAGUGGG m7b Disrupted HPSD3_10477_G14206.1_130511655
hsa-miR-3978 gcacCTTTCCACtgc GUGGAAAG m8a Created HPSD3_10477_G14206.1_130511655
hsa-miR-4735-3p GCACCTTTccactgc AAAGGUGC m8a Created HPSD3_10477_G14206.1_130511655
hsa-miR-4747-5p gcaCCTTCCCactgc AGGGAAGG m7b Disrupted HPSD3_10477_G14206.1_130511655
hsa-miR-5196-5p gcaCCTTCCCactgc AGGGAAGG m7b Disrupted HPSD3_10477_G14206.1_130511655
hsa-miR-6730-5p gcACCTTTCcactgc AGAAAGGU m7b (m6b->m7b) HPSD3_10477_G14206.1_130511655
hsa-miR-194-3p gcaccttCCCACTGc CCAGUGGG m7b Disrupted HPSD3_10477_G14206.1_130511655
hsa-miR-3978 gcacCTTTCCACtgc GUGGAAAG m8a Created HPSD3_10477_G14206.1_130511655
hsa-miR-4735-3p GCACCTTTccactgc AAAGGUGC m8a Created HPSD3_10477_G14206.1_130511655
hsa-miR-4747-5p gcaCCTTCCCactgc AGGGAAGG m7b Disrupted HPSD3_10477_G14206.1_130511655
hsa-miR-5196-5p gcaCCTTCCCactgc AGGGAAGG m7b Disrupted HPSD3_10477_G14206.1_130511655
hsa-miR-6730-5p gcACCTTTCcactgc AGAAAGGU m7b (m6b->m7b) HPSD3_10477_G14206.1_130511655

Mutation Mutation ID Sample Name Cancer Type
chr9:g.127749366C>T COSM3654496 TCGA-EE-A2GO-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-let-7a-5p gCTACCTCgaggcca UGAGGUAG m7b Disrupted HPSD3_10477_G14206.1_130511655
hsa-let-7b-5p gCTACCTCgaggcca UGAGGUAG m7b Disrupted HPSD3_10477_G14206.1_130511655
hsa-let-7c-5p gCTACCTCgaggcca UGAGGUAG m7b Disrupted HPSD3_10477_G14206.1_130511655
hsa-let-7d-5p gCTACCTCgaggcca AGAGGUAG m7b Disrupted HPSD3_10477_G14206.1_130511655
hsa-let-7e-5p gCTACCTCgaggcca UGAGGUAG m7b Disrupted HPSD3_10477_G14206.1_130511655
hsa-let-7f-5p gCTACCTCgaggcca UGAGGUAG m7b Disrupted HPSD3_10477_G14206.1_130511655
hsa-let-7g-5p gCTACCTCgaggcca UGAGGUAG m7b Disrupted HPSD3_10477_G14206.1_130511655
hsa-let-7i-5p gCTACCTCgaggcca UGAGGUAG m7b Disrupted HPSD3_10477_G14206.1_130511655
hsa-miR-4458 gCTACCTCgaggcca AGAGGUAG m7b Disrupted HPSD3_10477_G14206.1_130511655
hsa-miR-4500 gCTACCTCgaggcca UGAGGUAG m7b Disrupted HPSD3_10477_G14206.1_130511655
hsa-miR-4761-5p gctACCTTGaggcca ACAAGGUG m6b Created HPSD3_10477_G14206.1_130511655
hsa-miR-98-5p gCTACCTCgaggcca UGAGGUAG m7b Disrupted HPSD3_10477_G14206.1_130511655
hsa-let-7a-5p gCTACCTCgaggcca UGAGGUAG m7b Disrupted HPSD3_10477_G14206.1_130511655
hsa-let-7b-5p gCTACCTCgaggcca UGAGGUAG m7b Disrupted HPSD3_10477_G14206.1_130511655
hsa-let-7c-5p gCTACCTCgaggcca UGAGGUAG m7b Disrupted HPSD3_10477_G14206.1_130511655
hsa-let-7d-5p gCTACCTCgaggcca AGAGGUAG m7b Disrupted HPSD3_10477_G14206.1_130511655
hsa-let-7e-5p gCTACCTCgaggcca UGAGGUAG m7b Disrupted HPSD3_10477_G14206.1_130511655
hsa-let-7f-5p gCTACCTCgaggcca UGAGGUAG m7b Disrupted HPSD3_10477_G14206.1_130511655
hsa-let-7g-5p gCTACCTCgaggcca UGAGGUAG m7b Disrupted HPSD3_10477_G14206.1_130511655
hsa-let-7i-5p gCTACCTCgaggcca UGAGGUAG m7b Disrupted HPSD3_10477_G14206.1_130511655
hsa-miR-4458 gCTACCTCgaggcca AGAGGUAG m7b Disrupted HPSD3_10477_G14206.1_130511655
hsa-miR-4500 gCTACCTCgaggcca UGAGGUAG m7b Disrupted HPSD3_10477_G14206.1_130511655
hsa-miR-4761-5p gctACCTTGaggcca ACAAGGUG m6b Created HPSD3_10477_G14206.1_130511655
hsa-miR-98-5p gCTACCTCgaggcca UGAGGUAG m7b Disrupted HPSD3_10477_G14206.1_130511655
hsa-let-7a-5p gCTACCTCgaggcca UGAGGUAG m7b Disrupted HPSD3_10477_G14206.1_130511655
hsa-let-7b-5p gCTACCTCgaggcca UGAGGUAG m7b Disrupted HPSD3_10477_G14206.1_130511655
hsa-let-7c-5p gCTACCTCgaggcca UGAGGUAG m7b Disrupted HPSD3_10477_G14206.1_130511655
hsa-let-7d-5p gCTACCTCgaggcca AGAGGUAG m7b Disrupted HPSD3_10477_G14206.1_130511655
hsa-let-7e-5p gCTACCTCgaggcca UGAGGUAG m7b Disrupted HPSD3_10477_G14206.1_130511655
hsa-let-7f-5p gCTACCTCgaggcca UGAGGUAG m7b Disrupted HPSD3_10477_G14206.1_130511655
hsa-let-7g-5p gCTACCTCgaggcca UGAGGUAG m7b Disrupted HPSD3_10477_G14206.1_130511655
hsa-let-7i-5p gCTACCTCgaggcca UGAGGUAG m7b Disrupted HPSD3_10477_G14206.1_130511655
hsa-miR-4458 gCTACCTCgaggcca AGAGGUAG m7b Disrupted HPSD3_10477_G14206.1_130511655
hsa-miR-4500 gCTACCTCgaggcca UGAGGUAG m7b Disrupted HPSD3_10477_G14206.1_130511655
hsa-miR-4761-5p gctACCTTGaggcca ACAAGGUG m6b Created HPSD3_10477_G14206.1_130511655
hsa-miR-98-5p gCTACCTCgaggcca UGAGGUAG m7b Disrupted HPSD3_10477_G14206.1_130511655
hsa-let-7a-5p gCTACCTCgaggcca UGAGGUAG m7b Disrupted HPSD3_10477_G14206.1_130511655
hsa-let-7b-5p gCTACCTCgaggcca UGAGGUAG m7b Disrupted HPSD3_10477_G14206.1_130511655
hsa-let-7c-5p gCTACCTCgaggcca UGAGGUAG m7b Disrupted HPSD3_10477_G14206.1_130511655
hsa-let-7d-5p gCTACCTCgaggcca AGAGGUAG m7b Disrupted HPSD3_10477_G14206.1_130511655
hsa-let-7e-5p gCTACCTCgaggcca UGAGGUAG m7b Disrupted HPSD3_10477_G14206.1_130511655
hsa-let-7f-5p gCTACCTCgaggcca UGAGGUAG m7b Disrupted HPSD3_10477_G14206.1_130511655
hsa-let-7g-5p gCTACCTCgaggcca UGAGGUAG m7b Disrupted HPSD3_10477_G14206.1_130511655
hsa-let-7i-5p gCTACCTCgaggcca UGAGGUAG m7b Disrupted HPSD3_10477_G14206.1_130511655
hsa-miR-4458 gCTACCTCgaggcca AGAGGUAG m7b Disrupted HPSD3_10477_G14206.1_130511655
hsa-miR-4500 gCTACCTCgaggcca UGAGGUAG m7b Disrupted HPSD3_10477_G14206.1_130511655
hsa-miR-4761-5p gctACCTTGaggcca ACAAGGUG m6b Created HPSD3_10477_G14206.1_130511655
hsa-miR-98-5p gCTACCTCgaggcca UGAGGUAG m7b Disrupted HPSD3_10477_G14206.1_130511655
hsa-let-7a-5p gCTACCTCgaggcca UGAGGUAG m7b Disrupted HPSD3_10477_G14206.1_130511655
hsa-let-7b-5p gCTACCTCgaggcca UGAGGUAG m7b Disrupted HPSD3_10477_G14206.1_130511655
hsa-let-7c-5p gCTACCTCgaggcca UGAGGUAG m7b Disrupted HPSD3_10477_G14206.1_130511655
hsa-let-7d-5p gCTACCTCgaggcca AGAGGUAG m7b Disrupted HPSD3_10477_G14206.1_130511655
hsa-let-7e-5p gCTACCTCgaggcca UGAGGUAG m7b Disrupted HPSD3_10477_G14206.1_130511655
hsa-let-7f-5p gCTACCTCgaggcca UGAGGUAG m7b Disrupted HPSD3_10477_G14206.1_130511655
hsa-let-7g-5p gCTACCTCgaggcca UGAGGUAG m7b Disrupted HPSD3_10477_G14206.1_130511655
hsa-let-7i-5p gCTACCTCgaggcca UGAGGUAG m7b Disrupted HPSD3_10477_G14206.1_130511655
hsa-miR-4458 gCTACCTCgaggcca AGAGGUAG m7b Disrupted HPSD3_10477_G14206.1_130511655
hsa-miR-4500 gCTACCTCgaggcca UGAGGUAG m7b Disrupted HPSD3_10477_G14206.1_130511655
hsa-miR-4761-5p gctACCTTGaggcca ACAAGGUG m6b Created HPSD3_10477_G14206.1_130511655
hsa-miR-98-5p gCTACCTCgaggcca UGAGGUAG m7b Disrupted HPSD3_10477_G14206.1_130511655

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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