SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001251829
Gene Symbol: SPP1
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Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr4:g.87982951T>C COSN5064725 HX24T [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-9-3p aatGCTTTATagcaa AUAAAGCU m7a Disrupted HPHES_5985_G7965.1_88904102
hsa-miR-7843-3p aatGCTTCATagcaa AUGAAGCC m7a Created HPHES_5985_G7965.1_88904102
hsa-miR-5590-3p aatgCTTTATagcaa AAUAAAGU m6b Disrupted HPHES_5985_G7965.1_88904102
hsa-miR-4422 aATGCTTTatagcaa AAAAGCAU m7b Disrupted HPHES_5985_G7965.1_88904102
hsa-miR-340-5p aatgCTTTATAgcaa UUAUAAAG m7b Disrupted HPHES_5985_G7965.1_88904102
hsa-miR-31-3p aatgcttCATAGCAa UGCUAUGC m7a Created HPHES_5985_G7965.1_88904102
hsa-miR-142-5p aatgCTTTATagcaa CAUAAAGU m6b Disrupted HPHES_5985_G7965.1_88904102

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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