SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001244701
Gene Symbol: ZFP36L1

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr14:g.68790044A>C COSM433282 TCGA-A8-A07F-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1538 tgcccctCCGGGCCc CGGCCCGG m7b Created HPSD3_3292_G4412.1_69256753
hsa-miR-3184-5p tGCCCCTCcgggccc UGAGGGGC m7b Created HPSD3_3292_G4412.1_69256753
hsa-miR-423-5p tGCCCCTCcgggccc UGAGGGGC m7b Created HPSD3_3292_G4412.1_69256753
hsa-miR-4745-3p tgcccctCCGGGCCc UGGCCCGG m7b Created HPSD3_3292_G4412.1_69256753
hsa-miR-6789-5p tGCCCCTACgggccc GUAGGGGC m8a (m8a->m7a) HPSD3_3292_G4412.1_69256753

Mutation Mutation ID Sample Name Cancer Type
chr14:g.68790042G>T COSM1370744 TCGA-G4-6586-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4640-5p cccctaCTGGCCCcg UGGGCCAG m7b Created HPSD3_3292_G4412.1_69256753
hsa-miR-4726-5p cccctaCTGGCCCcg AGGGCCAG m7b Created HPSD3_3292_G4412.1_69256753
hsa-miR-6762-5p cccctacTGGCCCCg CGGGGCCA m7b Created HPSD3_3292_G4412.1_69256753
hsa-miR-6845-5p cccctacTGGCCCCg CGGGGCCA m7b Created HPSD3_3292_G4412.1_69256753

Mutation Mutation ID Sample Name Cancer Type
chr14:g.68790036C>T COSM131165 TCGA-78-7159-01 [lung][right_upper_lobe][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-214-3p cgggcCCTGCTGcca ACAGCAGG m7b Created HPSD3_3292_G4412.1_69256753
hsa-miR-3619-5p cgggcCCTGCTGcca UCAGCAGG m7b Created HPSD3_3292_G4412.1_69256753
hsa-miR-3918 cgGGCCCTGctgcca ACAGGGCC m7b (m6b->m7b) HPSD3_3292_G4412.1_69256753
hsa-miR-4781-5p cgggCCCCGCTgcca UAGCGGGG m7b Disrupted HPSD3_3292_G4412.1_69256753
hsa-miR-6132 cggGCCCTGCTgcca AGCAGGGC m8a Created HPSD3_3292_G4412.1_69256753
hsa-miR-6510-5p cgggCCCTGCTGcca CAGCAGGG m8a Created HPSD3_3292_G4412.1_69256753
hsa-miR-6836-5p cggGCCCTGCtgcca CGCAGGGC m7b Created HPSD3_3292_G4412.1_69256753
hsa-miR-7160-3p cGGGCCCTGctgcca CAGGGCCC m8a (m7a->m8a) HPSD3_3292_G4412.1_69256753
hsa-miR-744-5p cggGCCCCGCtgcca UGCGGGGC m7b Disrupted HPSD3_3292_G4412.1_69256753
hsa-miR-761 cgggcCCTGCTGCca GCAGCAGG m8a Created HPSD3_3292_G4412.1_69256753
hsa-miR-885-3p cgggcccCGCTGCCa AGGCAGCG m7b Disrupted HPSD3_3292_G4412.1_69256753

Mutation Mutation ID Sample Name Cancer Type
chr14:g.68790021C>ATCC COSM1477724 TCGA-D8-A1XA-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1272 ctTCATCATCcacaacgc GAUGAUGA m8a Created HPSD3_3292_G4412.1_69256753
hsa-miR-1322 cttCATCATCcacaacgc GAUGAUGC m7a Created HPSD3_3292_G4412.1_69256753
hsa-miR-3691-5p cttCATCCACaacgc AGUGGAUG m7b Disrupted HPSD3_3292_G4412.1_69256753
hsa-miR-376b-5p cttcATCCACaacgc CGUGGAUA m6b Disrupted HPSD3_3292_G4412.1_69256753
hsa-miR-376c-5p cttcATCCACaacgc GGUGGAUA m6b Disrupted HPSD3_3292_G4412.1_69256753
hsa-miR-4752 cttcATCCACAAcgc UUGUGGAU m8a Disrupted HPSD3_3292_G4412.1_69256753
hsa-miR-6833-5p cttcaTCCACAacgc GUGUGGAA m6b Disrupted HPSD3_3292_G4412.1_69256753
hsa-miR-8056 cttcATCCACaacgc CGUGGAUU m6b Disrupted HPSD3_3292_G4412.1_69256753

Mutation Mutation ID Sample Name Cancer Type
chr14:g.68790021ATCC>C COSM433281 TCGA-A2-A0T4-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1255a ccactTCATCCacaacgc AGGAUGAG m6b Disrupted HPSD3_3292_G4412.1_69256753
hsa-miR-1255b-5p ccactTCATCCacaacgc CGGAUGAG m6b Disrupted HPSD3_3292_G4412.1_69256753
hsa-miR-3190-3p ccaCTTCCACAacgc UGUGGAAG m8a Created HPSD3_3292_G4412.1_69256753
hsa-miR-3616-5p cCACTTCATccacaacgc AUGAAGUG m8a (m8a->m7a) HPSD3_3292_G4412.1_69256753
hsa-miR-3691-5p ccacttCATCCACaacgc AGUGGAUG m7b Disrupted HPSD3_3292_G4412.1_69256753
hsa-miR-376b-5p ccacttcATCCACaacgc CGUGGAUA m6b Disrupted HPSD3_3292_G4412.1_69256753
hsa-miR-376c-5p ccacttcATCCACaacgc GGUGGAUA m6b Disrupted HPSD3_3292_G4412.1_69256753
hsa-miR-4752 ccacttcATCCACAAcgc UUGUGGAU m8a Disrupted HPSD3_3292_G4412.1_69256753
hsa-miR-573 cCACTTCAtccacaacgc CUGAAGUG m7b Disrupted HPSD3_3292_G4412.1_69256753
hsa-miR-6833-5p ccacTTCCACAacgc GUGUGGAA m7b Created HPSD3_3292_G4412.1_69256753
hsa-miR-8056 ccacttcATCCACaacgc CGUGGAUU m6b Disrupted HPSD3_3292_G4412.1_69256753

Mutation Mutation ID Sample Name Cancer Type
chr14:g.68790020CA>A COSM1370743 TCGA-D5-5537-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1255a ctTCATCCacaacgct AGGAUGAG m6b Disrupted HPSD3_3292_G4412.1_69256753
hsa-miR-1255b-5p ctTCATCCacaacgct CGGAUGAG m6b Disrupted HPSD3_3292_G4412.1_69256753
hsa-miR-3691-5p cttCATCCACaacgct AGUGGAUG m7b Disrupted HPSD3_3292_G4412.1_69256753
hsa-miR-376b-5p cttcATCCACaacgct CGUGGAUA m6b Disrupted HPSD3_3292_G4412.1_69256753
hsa-miR-376c-5p cttcATCCACaacgct GGUGGAUA m6b Disrupted HPSD3_3292_G4412.1_69256753
hsa-miR-4752 cttcATCCACAAcgct UUGUGGAU m8a Disrupted HPSD3_3292_G4412.1_69256753
hsa-miR-6833-5p cttcaTCCACAacgct GUGUGGAA m6b Disrupted HPSD3_3292_G4412.1_69256753
hsa-miR-758-3p cttcaTCACAAcgct UUUGUGAC m6b Created HPSD3_3292_G4412.1_69256753
hsa-miR-8056 cttcATCCACaacgct CGUGGAUU m6b Disrupted HPSD3_3292_G4412.1_69256753
hsa-miR-8070 cttcATCACAacgct AUGUGAUU m6b Created HPSD3_3292_G4412.1_69256753

Mutation Mutation ID Sample Name Cancer Type
chr14:g.68789597C>T COSM2135276 TCGA-C5-A1BJ-01 [cervix][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3175 tcagaCTCCCCGacc CGGGGAGA m7a Disrupted HPSD3_3291_G4411.1_69256329
hsa-miR-425-3p tcagacTTCCCGAcc AUCGGGAA m7b Created HPSD3_3291_G4411.1_69256329
hsa-miR-4294 tcAGACTCCCcgacc GGGAGUCU m8a Disrupted HPSD3_3291_G4411.1_69256329
hsa-miR-6777-5p tcagaCTCCCCGacc ACGGGGAG m7b Disrupted HPSD3_3291_G4411.1_69256329
hsa-miR-6889-5p tcagaCTCCCCGAcc UCGGGGAG m8a Disrupted HPSD3_3291_G4411.1_69256329

Mutation Mutation ID Sample Name Cancer Type
chr14:g.68789026G>C COSN1170443 HCC116T [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-143-5p cacaACTGCACCttc GGUGCAGU m8a Disrupted HPSD3_3288_G4408.1_69255751
hsa-miR-18a-5p cacaactGCACCTTc UAAGGUGC m7b Disrupted HPSD3_3288_G4408.1_69255751
hsa-miR-18b-5p cacaactGCACCTTc UAAGGUGC m7b Disrupted HPSD3_3288_G4408.1_69255751
hsa-miR-4735-3p cacaactGCACCTTc AAAGGUGC m7b Disrupted HPSD3_3288_G4408.1_69255751
hsa-miR-6880-5p cacaaCTCCACCttc UGGUGGAG m7b Created HPSD3_3288_G4408.1_69255751

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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