SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001243877
Gene Symbol: TOB1

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr17:g.50863457C>G COSM1679919 A498 [kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4537 ccaagtTCGGCTCta UGAGCCGA m7b Disrupted HPTK7_3431_G4993.1_48940820
hsa-miR-6716-3p ccaAGTTCGGctcta UCCGAACU m7b Disrupted HPTK7_3431_G4993.1_48940820

Mutation Mutation ID Sample Name Cancer Type
chr17:g.50863450A>G COSM221834 ME001T [skin][extremity][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-96-5p cggctcTGCCAAAat UUUGGCAC m7a Created HPTK7_3431_G4993.1_48940820
hsa-miR-7150 cggctCTGCCAaaat CUGGCAGG m6b Created HPTK7_3431_G4993.1_48940820
hsa-miR-1271-5p cggctcTGCCAAaat CUUGGCAC m6b Created HPTK7_3431_G4993.1_48940820
hsa-miR-182-5p cggctcTGCCAAAat UUUGGCAA m7a Created HPTK7_3431_G4993.1_48940820
hsa-miR-3529-5p cggcTCTACCaaaat AGGUAGAC m6b Disrupted HPTK7_3431_G4993.1_48940820
hsa-miR-379-5p cggcTCTACCAaaat UGGUAGAC m7a Disrupted HPTK7_3431_G4993.1_48940820
hsa-miR-4451 cggCTCTACCAaaat UGGUAGAG m8a Disrupted HPTK7_3431_G4993.1_48940820
hsa-miR-4650-3p cggcTCTACCaaaat AGGUAGAA m6b Disrupted HPTK7_3431_G4993.1_48940820
hsa-miR-4732-5p cgGCTCTACcaaaat UGUAGAGC m7b (m7b->m6b) HPTK7_3431_G4993.1_48940820

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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