SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001243877
Gene Symbol: TOB1

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr17:g.50863986T>G COSM1679921 HCC2998 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-7849-3p ctaAATTGTattatt GACAAUUG m6b Created HPSD3_4530_G5991.1_48941365
hsa-miR-655-3p ctaaatTGTATTATt AUAAUACA m8a Created HPSD3_4530_G5991.1_48941365
hsa-miR-4666a-3p ctaaATTGTATtatt CAUACAAU m7b Created HPSD3_4530_G5991.1_48941365
hsa-miR-4282 ctAAATTTTAttatt UAAAAUUU m8a Disrupted HPSD3_4530_G5991.1_48941365
hsa-miR-374c-5p ctaaatTGTATTATt AUAAUACA m8a Created HPSD3_4530_G5991.1_48941365
hsa-miR-369-3p ctaaattGTATTATt AAUAAUAC m7b Created HPSD3_4530_G5991.1_48941365
hsa-miR-3606-3p ctAAATTTTattatt AAAAUUUC m7a (m7a->m6a) HPSD3_4530_G5991.1_48941365
hsa-miR-32-3p CTAAATTGtattatt CAAUUUAG m8a Created HPSD3_4530_G5991.1_48941365
hsa-miR-3163 ctaaATTTTATtatt UAUAAAAU m7b Disrupted HPSD3_4530_G5991.1_48941365

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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