SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001243799
Gene Symbol: TSC22D1

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr13:g.44574860G>A COSM947620 TCGA-AP-A0LM-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3150a-5p acacttCGAGGTTca CAACCUCG m7b Disrupted HPTK7_2332_G3369.1_45148999
hsa-miR-3150b-5p acacttCGAGGTTca CAACCUCG m7b Disrupted HPTK7_2332_G3369.1_45148999
hsa-miR-3616-5p aCACTTCAaggttca AUGAAGUG m7b Created HPTK7_2332_G3369.1_45148999
hsa-miR-4635 acaCTTCAAGgttca UCUUGAAG m7b Created HPTK7_2332_G3369.1_45148999
hsa-miR-573 aCACTTCAaggttca CUGAAGUG m7b Created HPTK7_2332_G3369.1_45148999

Mutation Mutation ID Sample Name Cancer Type
chr13:g.44574854C>T COSM432419 TCGA-B6-A0WZ-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-618 cgaggttTAGAGTTg AAACUCUA m7b Created HPTK7_2332_G3369.1_45148999
hsa-miR-146a-3p cgaggTTCAGAGttg CCUCUGAA m7b Disrupted HPTK7_2332_G3369.1_45148999
hsa-miR-4539 cgagGTTCAGagttg GCUGAACU m6b Disrupted HPTK7_2332_G3369.1_45148999
hsa-miR-4714-5p cgaggtTCAGAGTTg AACUCUGA m8a Disrupted HPTK7_2332_G3369.1_45148999
hsa-miR-520f-5p cgaggTTTAGAGttg CCUCUAAA m7b Created HPTK7_2332_G3369.1_45148999

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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