SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001243203
Gene Symbol: RANBP6

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr9:g.6012838G>C COSM1554950 TCGA-95-7947-01 [lung][right_upper_lobe][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6872-5p tATGCGAGAtaacaa UCUCGCAU m8a (m8a->m7a) HPTK7_7836_G11785.1_6012842
hsa-miR-6814-3p tATGCGAGataacaa ACUCGCAU m7b Disrupted HPTK7_7836_G11785.1_6012842

Mutation Mutation ID Sample Name Cancer Type
chr9:g.6012280A>T COSN524643 TCGA-AO-A12A-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-5692c cacttTATTATaact AAUAAUAU m6b Created HPTK7_7835_G11784.1_6012277
hsa-miR-656-3p cacttTAATATaact AAUAUUAU m6b Disrupted HPTK7_7835_G11784.1_6012277
hsa-miR-142-5p cACTTTATtataact CAUAAAGU m7b Created HPTK7_7835_G11784.1_6012277
hsa-miR-5692b cacttTATTATaact AAUAAUAU m6b Created HPTK7_7835_G11784.1_6012277
hsa-miR-5590-3p cACTTTATTataact AAUAAAGU m8a (m7a->m8a) HPTK7_7835_G11784.1_6012277
hsa-miR-374b-5p cacttTATTATAact AUAUAAUA m7b Created HPTK7_7835_G11784.1_6012277
hsa-miR-374a-5p cacttTATTATAAct UUAUAAUA m8a Created HPTK7_7835_G11784.1_6012277
hsa-miR-369-3p cacttTATTATaact AAUAAUAC m6b Created HPTK7_7835_G11784.1_6012277

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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