SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001243203
Gene Symbol: RANBP6

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr9:g.6014120AAAT>T COSM111696 TCGA-23-1024-01 [ovary][NS][carcinoma][serous_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3668 tggtgaaTCTACATT AAUGUAGA m8a Created HHHNH_3020_RANBP6|NM_001243202|exon_CDS|-7.15276732272174|1.23962807684085
hsa-miR-376a-2-5p tggtgAATCTACatt GGUAGAUU m7b Created HHHNH_3020_RANBP6|NM_001243202|exon_CDS|-7.15276732272174|1.23962807684085
hsa-miR-376a-5p tggtGAATCTACatt GUAGAUUC m8a Created HHHNH_3020_RANBP6|NM_001243202|exon_CDS|-7.15276732272174|1.23962807684085
hsa-miR-3935 tggtgaATCTACAtt UGUAGAUA m7a Created HHHNH_3020_RANBP6|NM_001243202|exon_CDS|-7.15276732272174|1.23962807684085
hsa-miR-5096 tGGTGAAAaatctacatt GUUUCACC m7b Disrupted HHHNH_3020_RANBP6|NM_001243202|exon_CDS|-7.15276732272174|1.23962807684085

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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