SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001207033
Gene Symbol: RNF40

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr16:g.30774003C>T COSM970002 TCGA-BG-A0M8-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3190-3p gCTTCCACgttttct UGUGGAAG m7b Disrupted HPTK7_2901_G4248.1_30785314
hsa-miR-424-3p gcttccACGTTTTct CAAAACGU m7b Disrupted HPTK7_2901_G4248.1_30785314
hsa-miR-4802-3p gctTCCATGTtttct UACAUGGA m7b Created HPTK7_2901_G4248.1_30785314
hsa-miR-570-3p gcttccaTGTTTTCt CGAAAACA m7b Created HPTK7_2901_G4248.1_30785314

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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