SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001202547
Gene Symbol: SYNJ2BP-COX16

Somatic mutations that impact miRNA target sites

Mutation Mutation ID Sample Name Cancer Type
chr14:g.70359589T>G COSN6257605 RK220_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Mutation Mutation ID Sample Name Cancer Type
chr14:g.70359586T>C COSM1607902 HCC111T [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr14:g.70359582T>G COSM1607901 HCC111T [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-19a-3p tcatgTTTGCACccg UGUGCAAA m7b Disrupted HPKTB_3560_G4503.1_70826301
hsa-miR-19b-3p tcatgTTTGCACccg UGUGCAAA m7b Disrupted HPKTB_3560_G4503.1_70826301

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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