SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001199706
Gene Symbol: KIAA0895

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr7:g.36334147C>T COSM1089375 587376 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3613-3p ttaTTTTTGaggtat ACAAAAAA m6b Created HPTK7_7233_G10813.1_36373756
hsa-miR-371b-5p ttatTTTTGAGgtat ACUCAAAA m7b Created HPTK7_7233_G10813.1_36373756
hsa-miR-373-5p ttatTTTTGAGgtat ACUCAAAA m7b Created HPTK7_7233_G10813.1_36373756
hsa-miR-4777-3p ttattttTGAGGTAt AUACCUCA m7b Created HPTK7_7233_G10813.1_36373756
hsa-miR-548c-3p ttATTTTTGaggtat CAAAAAUC m7a (m6a->m7a) HPTK7_7233_G10813.1_36373756
hsa-miR-616-5p ttatTTTTGAGgtat ACUCAAAA m7b Created HPTK7_7233_G10813.1_36373756
hsa-miR-3613-3p ttaTTTTTGaggtat ACAAAAAA m6b Created HPTK7_7233_G10813.1_36373756
hsa-miR-371b-5p ttatTTTTGAGgtat ACUCAAAA m7b Created HPTK7_7233_G10813.1_36373756
hsa-miR-373-5p ttatTTTTGAGgtat ACUCAAAA m7b Created HPTK7_7233_G10813.1_36373756
hsa-miR-4777-3p ttattttTGAGGTAt AUACCUCA m7b Created HPTK7_7233_G10813.1_36373756
hsa-miR-548c-3p ttATTTTTGaggtat CAAAAAUC m7a (m6a->m7a) HPTK7_7233_G10813.1_36373756
hsa-miR-616-5p ttatTTTTGAGgtat ACUCAAAA m7b Created HPTK7_7233_G10813.1_36373756
hsa-miR-3613-3p ttaTTTTTGaggtat ACAAAAAA m6b Created HPTK7_7233_G10813.1_36373756
hsa-miR-371b-5p ttatTTTTGAGgtat ACUCAAAA m7b Created HPTK7_7233_G10813.1_36373756
hsa-miR-373-5p ttatTTTTGAGgtat ACUCAAAA m7b Created HPTK7_7233_G10813.1_36373756
hsa-miR-4777-3p ttattttTGAGGTAt AUACCUCA m7b Created HPTK7_7233_G10813.1_36373756
hsa-miR-548c-3p ttATTTTTGaggtat CAAAAAUC m7a (m6a->m7a) HPTK7_7233_G10813.1_36373756
hsa-miR-616-5p ttatTTTTGAGgtat ACUCAAAA m7b Created HPTK7_7233_G10813.1_36373756

Mutation Mutation ID Sample Name Cancer Type
chr7:g.36334146G>A COSM261562 TCGA-AG-A002-01 [large_intestine][rectum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3200-3p tattttCAAGGTatt CACCUUGC m6b Created HPTK7_7233_G10813.1_36373756
hsa-miR-6813-3p tattttCAAGGTatt AACCUUGG m6b Created HPTK7_7233_G10813.1_36373756
hsa-miR-875-5p tattttcGAGGTATt UAUACCUC m7b Disrupted HPTK7_7233_G10813.1_36373756
hsa-miR-3200-3p tattttCAAGGTatt CACCUUGC m6b Created HPTK7_7233_G10813.1_36373756
hsa-miR-6813-3p tattttCAAGGTatt AACCUUGG m6b Created HPTK7_7233_G10813.1_36373756
hsa-miR-875-5p tattttcGAGGTATt UAUACCUC m7b Disrupted HPTK7_7233_G10813.1_36373756

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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