SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001199295
Gene Symbol: ZNF549

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr19:g.57537834G>A COSM4965472 PCSI_0132_Pa_P_526 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-let-7a-2-3p tatgTGTACAatata CUGUACAG m6b Created HPTK7_3888_G5654.1_58049200
hsa-let-7c-3p tatgTGTACAatata CUGUACAA m6b Created HPTK7_3888_G5654.1_58049200
hsa-let-7g-3p tatgTGTACAatata CUGUACAG m6b Created HPTK7_3888_G5654.1_58049200
hsa-miR-25-3p tatgtGTGCAATata CAUUGCAC m7b Disrupted HPTK7_3888_G5654.1_58049200
hsa-miR-32-5p tatgtGTGCAATAta UAUUGCAC m8a Disrupted HPTK7_3888_G5654.1_58049200
hsa-miR-363-3p tatgtGTGCAATata AAUUGCAC m7b Disrupted HPTK7_3888_G5654.1_58049200
hsa-miR-367-3p tatgtGTGCAATata AAUUGCAC m7b Disrupted HPTK7_3888_G5654.1_58049200
hsa-miR-466 tATGTGTAcaatata AUACACAU m7b Created HPTK7_3888_G5654.1_58049200
hsa-miR-8064 tatGTGTGCaatata AGCACACU m6b Disrupted HPTK7_3888_G5654.1_58049200
hsa-miR-92a-3p tatgtGTGCAATAta UAUUGCAC m8a Disrupted HPTK7_3888_G5654.1_58049200
hsa-miR-92b-3p tatgtGTGCAATAta UAUUGCAC m8a Disrupted HPTK7_3888_G5654.1_58049200
hsa-let-7a-2-3p tatgTGTACAatata CUGUACAG m6b Created HPTK7_3888_G5654.1_58049200
hsa-let-7c-3p tatgTGTACAatata CUGUACAA m6b Created HPTK7_3888_G5654.1_58049200
hsa-let-7g-3p tatgTGTACAatata CUGUACAG m6b Created HPTK7_3888_G5654.1_58049200
hsa-miR-25-3p tatgtGTGCAATata CAUUGCAC m7b Disrupted HPTK7_3888_G5654.1_58049200
hsa-miR-32-5p tatgtGTGCAATAta UAUUGCAC m8a Disrupted HPTK7_3888_G5654.1_58049200
hsa-miR-363-3p tatgtGTGCAATata AAUUGCAC m7b Disrupted HPTK7_3888_G5654.1_58049200
hsa-miR-367-3p tatgtGTGCAATata AAUUGCAC m7b Disrupted HPTK7_3888_G5654.1_58049200
hsa-miR-466 tATGTGTAcaatata AUACACAU m7b Created HPTK7_3888_G5654.1_58049200
hsa-miR-8064 tatGTGTGCaatata AGCACACU m6b Disrupted HPTK7_3888_G5654.1_58049200
hsa-miR-92a-3p tatgtGTGCAATAta UAUUGCAC m8a Disrupted HPTK7_3888_G5654.1_58049200
hsa-miR-92b-3p tatgtGTGCAATAta UAUUGCAC m8a Disrupted HPTK7_3888_G5654.1_58049200

Mutation Mutation ID Sample Name Cancer Type
chr19:g.57537833T>C COSM1234254 587376 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-let-7i-3p ttatgTGCGCAatat CUGCGCAA m6b Created HPTK7_3888_G5654.1_58049200
hsa-miR-25-3p ttatgtGTGCAATat CAUUGCAC m7b Disrupted HPTK7_3888_G5654.1_58049200
hsa-miR-32-5p ttatgtGTGCAATAt UAUUGCAC m8a Disrupted HPTK7_3888_G5654.1_58049200
hsa-miR-363-3p ttatgtGTGCAATat AAUUGCAC m7b Disrupted HPTK7_3888_G5654.1_58049200
hsa-miR-367-3p ttatgtGTGCAATat AAUUGCAC m7b Disrupted HPTK7_3888_G5654.1_58049200
hsa-miR-4789-3p tTATGTGTGcaatat CACACAUA m8a (m8a->m7a) HPTK7_3888_G5654.1_58049200
hsa-miR-8064 ttatGTGTGCaatat AGCACACU m6b Disrupted HPTK7_3888_G5654.1_58049200
hsa-miR-92a-3p ttatgtGTGCAATAt UAUUGCAC m8a Disrupted HPTK7_3888_G5654.1_58049200
hsa-miR-92b-3p ttatgtGTGCAATAt UAUUGCAC m8a Disrupted HPTK7_3888_G5654.1_58049200
hsa-let-7i-3p ttatgTGCGCAatat CUGCGCAA m6b Created HPTK7_3888_G5654.1_58049200
hsa-miR-25-3p ttatgtGTGCAATat CAUUGCAC m7b Disrupted HPTK7_3888_G5654.1_58049200
hsa-miR-32-5p ttatgtGTGCAATAt UAUUGCAC m8a Disrupted HPTK7_3888_G5654.1_58049200
hsa-miR-363-3p ttatgtGTGCAATat AAUUGCAC m7b Disrupted HPTK7_3888_G5654.1_58049200
hsa-miR-367-3p ttatgtGTGCAATat AAUUGCAC m7b Disrupted HPTK7_3888_G5654.1_58049200
hsa-miR-4789-3p tTATGTGTGcaatat CACACAUA m8a (m8a->m7a) HPTK7_3888_G5654.1_58049200
hsa-miR-8064 ttatGTGTGCaatat AGCACACU m6b Disrupted HPTK7_3888_G5654.1_58049200
hsa-miR-92a-3p ttatgtGTGCAATAt UAUUGCAC m8a Disrupted HPTK7_3888_G5654.1_58049200
hsa-miR-92b-3p ttatgtGTGCAATAt UAUUGCAC m8a Disrupted HPTK7_3888_G5654.1_58049200

Mutation Mutation ID Sample Name Cancer Type
chr19:g.57537830G>A COSM2972617 RKO [large_intestine][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4789-3p gcctTATGTGTGcaa CACACAUA m8a Disrupted HPTK7_3888_G5654.1_58049200
hsa-miR-5589-3p gccttatATGTGCAa UGCACAUG m7a Created HPTK7_3888_G5654.1_58049200
hsa-miR-8064 gccttatGTGTGCaa AGCACACU m6b Disrupted HPTK7_3888_G5654.1_58049200
hsa-miR-4789-3p gcctTATGTGTGcaa CACACAUA m8a Disrupted HPTK7_3888_G5654.1_58049200
hsa-miR-5589-3p gccttatATGTGCAa UGCACAUG m7a Created HPTK7_3888_G5654.1_58049200
hsa-miR-8064 gccttatGTGTGCaa AGCACACU m6b Disrupted HPTK7_3888_G5654.1_58049200

Mutation Mutation ID Sample Name Cancer Type
chr19:g.57537825C>A COSM475382 TCGA-B0-4700-01 [kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-155-5p gaaaAGCATTAtgtg UUAAUGCU m7b Created HPTK7_3888_G5654.1_58049200
hsa-miR-3119 gAAAAGCCttatgtg UGGCUUUU m7b Disrupted HPTK7_3888_G5654.1_58049200
hsa-miR-155-5p gaaaAGCATTAtgtg UUAAUGCU m7b Created HPTK7_3888_G5654.1_58049200
hsa-miR-3119 gAAAAGCCttatgtg UGGCUUUU m7b Disrupted HPTK7_3888_G5654.1_58049200

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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