SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001198950
Gene Symbol: MYO16

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr13:g.109140685G>A COSM4793564 BCB157T [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6799-3p aggcgGCAGGGCccc UGCCCUGC m7b Created HHHNH_2387_MYO16|NM_001198950|exon_CDS|-0.251912802960121|1.71974818491502
hsa-miR-6775-3p aggcggCAGGGCCcc AGGCCCUG m7b Created HHHNH_2387_MYO16|NM_001198950|exon_CDS|-0.251912802960121|1.71974818491502
hsa-miR-6752-3p aggcGGCAGGGcccc UCCCUGCC m7b Created HHHNH_2387_MYO16|NM_001198950|exon_CDS|-0.251912802960121|1.71974818491502
hsa-miR-1291 aggcggCAGGGCCcc UGGCCCUG m7b Created HHHNH_2387_MYO16|NM_001198950|exon_CDS|-0.251912802960121|1.71974818491502
hsa-miR-3173-5p aggcgGCAGGGCccc UGCCCUGC m7b Created HHHNH_2387_MYO16|NM_001198950|exon_CDS|-0.251912802960121|1.71974818491502
hsa-miR-296-5p aggcggcGGGGCCCc AGGGCCCC m7b Disrupted HHHNH_2387_MYO16|NM_001198950|exon_CDS|-0.251912802960121|1.71974818491502

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser