SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001195107
Gene Symbol: TLR10
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr4:g.38775355T>C COSM1055131 TCGA-A5-A0VP-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3622b-5p ttgattCCATGCCat AGGCAUGG m7b Created HPSD3_7603_G10221.1_38776968

Mutation Mutation ID Sample Name Cancer Type
chr4:g.38775343G>A COSM1055130 TCGA-B5-A0JY-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4452 cataacaGAATTCAa UUGAAUUC m7b Disrupted HPSD3_7603_G10221.1_38776968
hsa-miR-4652-3p catAACAGAAttcaa GUUCUGUU m7b Disrupted HPSD3_7603_G10221.1_38776968
hsa-miR-4778-5p cataACAGAATTcaa AAUUCUGU m8a Disrupted HPSD3_7603_G10221.1_38776968

Mutation Mutation ID Sample Name Cancer Type
chr4:g.38775338C>A COSM1055129 TCGA-BS-A0UV-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1267 cagaatTCAACAGct CCUGUUGA m7b Disrupted HPSD3_7603_G10221.1_38776968
hsa-miR-183-3p cagAATTCAacagct GUGAAUUA m6b Disrupted HPSD3_7603_G10221.1_38776968
hsa-miR-4452 caGAATTCAAcagct UUGAAUUC m8a Disrupted HPSD3_7603_G10221.1_38776968
hsa-miR-653-5p cagaaTTCAACAgct GUGUUGAA m7b Disrupted HPSD3_7603_G10221.1_38776968

Mutation Mutation ID Sample Name Cancer Type
chr4:g.38775029T>G COSM4124530 TCGA-BR-8589-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4426 gcCCATCTTaaacac GAAGAUGG m7b (m7b->m6b) HPSD3_7602_G10220.1_38776628
hsa-miR-4647 gcCCATCTTaaacac GAAGAUGG m7b (m7b->m6b) HPSD3_7602_G10220.1_38776628
hsa-miR-4662b gcCCATCTTaaacac AAAGAUGG m7b (m7b->m6b) HPSD3_7602_G10220.1_38776628

Mutation Mutation ID Sample Name Cancer Type
chr4:g.38775012G>T COSM2846308 CADO-ES1 [bone][NS][Ewings_sarcoma-peripheral_primitive_neuroectodermal_tumour][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-143-5p caaaACTGCACattg GGUGCAGU m7b Disrupted HPSD3_7602_G10220.1_38776628
hsa-miR-3611 caaaaCTTCACAttg UUGUGAAG m7b Created HPSD3_7602_G10220.1_38776628
hsa-miR-4328 cAAAACTGcacattg CCAGUUUU m7b Disrupted HPSD3_7602_G10220.1_38776628
hsa-miR-8066 caaaactTCACATTg CAAUGUGA m7b Created HPSD3_7602_G10220.1_38776628

Mutation Mutation ID Sample Name Cancer Type
chr4:g.38775011C>A COSM4609065 2293782 [adrenal_gland][adrenal_gland][adrenal_cortical_carcinoma][functioning]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-143-5p aaaACTGCACattgt GGUGCAGU m7b Disrupted HPSD3_7602_G10220.1_38776628

Mutation Mutation ID Sample Name Cancer Type
chr4:g.38774182A>G COSM271563 TCGA-AA-3833-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-148b-5p ttacgAGAACTaaat AAGUUCUG m6b Disrupted HPSD3_7601_G10219.1_38775790
hsa-miR-3168 ttacgAGAACTaaat GAGUUCUA m6b Disrupted HPSD3_7601_G10219.1_38775790
hsa-miR-4540 ttacgAGGACTAAat UUAGUCCU m8a Created HPSD3_7601_G10219.1_38775790
hsa-miR-5584-3p ttacgAGAACTAaat UAGUUCUU m7a Disrupted HPSD3_7601_G10219.1_38775790
hsa-miR-6723-5p ttacgaGGACTAaat AUAGUCCG m6b Created HPSD3_7601_G10219.1_38775790
hsa-miR-6838-3p ttacgAGGACTaaat AAGUCCUG m6b Created HPSD3_7601_G10219.1_38775790
hsa-miR-6874-3p ttacgAGAACTaaat CAGUUCUG m6b Disrupted HPSD3_7601_G10219.1_38775790

Mutation Mutation ID Sample Name Cancer Type
chr4:g.38774181A>G COSM447824 TCGA-E2-A108-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-148b-5p tacgAGAACTaaata AAGUUCUG m6b Disrupted HPSD3_7601_G10219.1_38775790
hsa-miR-3168 tacgAGAACTaaata GAGUUCUA m6b Disrupted HPSD3_7601_G10219.1_38775790
hsa-miR-5584-3p tacgAGAACTAaata UAGUUCUU m7a Disrupted HPSD3_7601_G10219.1_38775790
hsa-miR-6874-3p tacgAGAACTaaata CAGUUCUG m6b Disrupted HPSD3_7601_G10219.1_38775790

Mutation Mutation ID Sample Name Cancer Type
chr4:g.38774155C>T COSM3380915 PCSI_0066_Pa_X [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4275 tttcTAATTGatctc CCAAUUAC m6b Created HPSD3_7601_G10219.1_38775790
hsa-miR-935 tttcTAACTGatctc CCAGUUAC m6b Disrupted HPSD3_7601_G10219.1_38775790

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser