SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001193535
Gene Symbol: FBXL5

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr4:g.15605662T>C COSN7744590 8049749 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-573 tgCACTTCActcata CUGAAGUG m7b (m6b->m7b) HPHES_6122_G8160.1_15607291
hsa-miR-93-5p tGCACTTTactcata CAAAGUGC m7b Disrupted HPHES_6122_G8160.1_15607291
hsa-miR-20a-5p tGCACTTTActcata UAAAGUGC m8a (m8a->m7a) HPHES_6122_G8160.1_15607291
hsa-miR-106b-5p tGCACTTTActcata UAAAGUGC m8a (m8a->m7a) HPHES_6122_G8160.1_15607291
hsa-miR-17-5p tGCACTTTactcata CAAAGUGC m7b Disrupted HPHES_6122_G8160.1_15607291
hsa-miR-106a-5p tGCACTTTactcata AAAAGUGC m7b Disrupted HPHES_6122_G8160.1_15607291
hsa-miR-20b-5p tGCACTTTactcata CAAAGUGC m7b Disrupted HPHES_6122_G8160.1_15607291
hsa-miR-3609 tgCACTTTactcata CAAAGUGA m6b Disrupted HPHES_6122_G8160.1_15607291
hsa-miR-3616-5p tgCACTTCActcata AUGAAGUG m7b (m6b->m7b) HPHES_6122_G8160.1_15607291
hsa-miR-372-3p tGCACTTTactcata AAAGUGCU m7a Disrupted HPHES_6122_G8160.1_15607291

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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