SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
||||||||
Home | Search | Help | Download |
Transcript ID: | NM_001193465 |
---|---|
Gene Symbol: | KANSL1 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr17:g.46032186C>T | COSM4485604 | CSCC-38-T | [skin][head_neck][carcinoma][squamous_cell_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-496 | gAATACTCccatggt | UGAGUAUU | m7b | Disrupted | HPSD3_4502_G5959.1_44109548 |
hsa-miR-6871-5p | gaataCTCCCATGgt | CAUGGGAG | m8a | Disrupted | HPSD3_4502_G5959.1_44109548 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr17:g.46032185C>T | COSM4485611 | CSCC-31-T | [skin][head_neck][carcinoma][squamous_cell_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-4712-3p | aataCTCTCATggtc | AAUGAGAG | m7b | Created | HPSD3_4502_G5959.1_44109548 |
hsa-miR-6871-5p | aataCTCCCATGgtc | CAUGGGAG | m8a | Disrupted | HPSD3_4502_G5959.1_44109548 |
hsa-miR-7153-3p | aatactcCCATGGTc | CACCAUGG | m7b | Disrupted | HPSD3_4502_G5959.1_44109548 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr17:g.46032171C>T | COSM4402398 | TCGA-D9-A6EC-06 | [skin][NS][malignant_melanoma][NS] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-3144-5p | caGTCCCCTaggagc | AGGGGACC | m7a | (m7a->m6a) | HPSD3_4502_G5959.1_44109548 |
hsa-miR-4475 | caGTCCCTTaggagc | CAAGGGAC | m7b | (m6b->m7b) | HPSD3_4502_G5959.1_44109548 |
hsa-miR-4652-5p | cAGTCCCCTaggagc | AGGGGACU | m8a | (m8a->m7a) | HPSD3_4502_G5959.1_44109548 |
hsa-miR-5571-3p | cagtccCCTAGGAgc | GUCCUAGG | m7b | Disrupted | HPSD3_4502_G5959.1_44109548 |
hsa-miR-6824-5p | cagTCCCCTAggagc | GUAGGGGA | m7b | Disrupted | HPSD3_4502_G5959.1_44109548 |
hsa-miR-6892-5p | cagTCCCTTAggagc | GUAAGGGA | m7b | Created | HPSD3_4502_G5959.1_44109548 |
hsa-miR-7845-5p | caGTCCCTTaggagc | AAGGGACA | m7a | (m6a->m7a) | HPSD3_4502_G5959.1_44109548 |