SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001193277
Gene Symbol: MID1
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chrX:g.10449506C>T COSM4702168 T3094 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-8082 ctttgaaCTCCATCc UGAUGGAG m7b Disrupted HPKTB_11152_G14372.1_10417533
hsa-miR-6514-5p ctttgaACTCCATcc UAUGGAGU m7b Disrupted HPKTB_11152_G14372.1_10417533
hsa-miR-4534 ctttgaaCTCCATCc GGAUGGAG m7b Disrupted HPKTB_11152_G14372.1_10417533

Mutation Mutation ID Sample Name Cancer Type
chrX:g.10449485C>T COSM1112364 TCGA-D1-A17Q-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-548m acACCTTTGacgtcg CAAAGGUA m7a (m6a->m7a) HPKTB_11152_G14372.1_10417533

Mutation Mutation ID Sample Name Cancer Type
chrX:g.10449484G>A COSM4749860 pfg317T [stomach][NS][carcinoma][diffuse_adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID

No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.
*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser