SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001189
Gene Symbol: NKX3-2

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr4:g.13542451G>C COSM585804 TCGA-05-4244-01 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3648 cggggcCCGCGGCgg AGCCGCGG m7b Created HHHNH_2532_NKX3-2|NM_001189|exon_CDS|-1.29978882149196|0.769852954218756
hsa-miR-296-5p cGGGGCCCgcggcgg AGGGCCCC m7b Created HHHNH_2532_NKX3-2|NM_001189|exon_CDS|-1.29978882149196|0.769852954218756

Mutation Mutation ID Sample Name Cancer Type
chr4:g.13542441G>T COSM1539387 TCGA-78-7155-01 [lung][right_upper_lobe][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4632-3p ggcggGGGCGGCAgc UGCCGCCC m8a Disrupted HHHNH_2532_NKX3-2|NM_001189|exon_CDS|-1.29978882149196|0.769852954218756

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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