SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001185075
Gene Symbol: FMR1
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chrX:g.147943216C>G COSM756013 TCGA-66-2786-01 [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-155-3p atcTGTAGGAtttgg CUCCUACA m7b Created HPSD3_10929_G14850.1_147024741
hsa-miR-487b-3p atctGTACGATTtgg AAUCGUAC m8a Disrupted HPSD3_10929_G14850.1_147024741

Mutation Mutation ID Sample Name Cancer Type
chrX:g.147928765T>C COSM3973351 TCGA-FG-8188-01 [central_nervous_system][brain][glioma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-5196-5p gataCTTCCCataag AGGGAAGG m6b Created HPSD3_10719_G14576.1_147010282
hsa-miR-4747-5p gataCTTCCCataag AGGGAAGG m6b Created HPSD3_10719_G14576.1_147010282
hsa-miR-6871-5p gatactTCCCATaag CAUGGGAG m6b Created HPSD3_10719_G14576.1_147010282
hsa-miR-5196-5p gataCTTCCCataag AGGGAAGG m6b Created HPSD3_10719_G14576.1_147010282
hsa-miR-4747-5p gataCTTCCCataag AGGGAAGG m6b Created HPSD3_10719_G14576.1_147010282
hsa-miR-3978 gataCTTTCCAtaag GUGGAAAG m7b Disrupted HPSD3_10719_G14576.1_147010282
hsa-miR-3688-3p gatacTTTCCATAag UAUGGAAA m8a Disrupted HPSD3_10719_G14576.1_147010282
hsa-miR-3115 gatacttCCCATAag AUAUGGGU m6b Created HPSD3_10719_G14576.1_147010282
hsa-miR-3978 gataCTTTCCAtaag GUGGAAAG m7b Disrupted HPSD3_10719_G14576.1_147010282
hsa-miR-3688-3p gatacTTTCCATAag UAUGGAAA m8a Disrupted HPSD3_10719_G14576.1_147010282
hsa-miR-3115 gatacttCCCATAag AUAUGGGU m6b Created HPSD3_10719_G14576.1_147010282
hsa-miR-6871-5p gatactTCCCATaag CAUGGGAG m6b Created HPSD3_10719_G14576.1_147010282

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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