SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001178116
Gene Symbol: ABI1

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr10:g.26777156T>C COSM917356 TCGA-D1-A17D-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-126-5p cacaaAATAATagca CAUUAUUA m6b Disrupted HPHES_1151_G1533.1_27066081
hsa-miR-19a-5p caCAAAACaatagca AGUUUUGC m6b Created HPHES_1151_G1533.1_27066081
hsa-miR-19b-1-5p caCAAAACaatagca AGUUUUGC m6b Created HPHES_1151_G1533.1_27066081
hsa-miR-19b-2-5p caCAAAACaatagca AGUUUUGC m6b Created HPHES_1151_G1533.1_27066081
hsa-miR-2052 caCAAAACAatagca UGUUUUGA m7a (m6a->m7a) HPHES_1151_G1533.1_27066081
hsa-miR-4795-3p cacaaAATAATAgca AUAUUAUU m7b Disrupted HPHES_1151_G1533.1_27066081

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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