SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: NM_001168
Gene Symbol: BIRC5
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Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr17:g.78223711C>CT COSM1610893 BN50T [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3617-5p gtttTGTCTTTgaaag AAAGACAU m7a Created HPKMA_6423_G7462.1_76219783
hsa-miR-548u gttttGTCTTTGaaag CAAAGACU m7a Created HPKMA_6423_G7462.1_76219783
hsa-miR-641 gtttTGTCTTTgaaag AAAGACAU m7a Created HPKMA_6423_G7462.1_76219783
hsa-miR-7161-5p gttttGTCTTTgaaag UAAAGACU m6b Created HPKMA_6423_G7462.1_76219783

Mutation Mutation ID Sample Name Cancer Type
chr17:g.78223702T>C COSM3820768 TCGA-AO-A12E-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-335-5p tgtGCTCTTGttttg UCAAGAGC m7b Disrupted HPKMA_6423_G7462.1_76219783

Mutation Mutation ID Sample Name Cancer Type
chr17:g.78216700C>T COSM3522794 TCGA-EE-A2GI-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-651-3p gcgcTTTCCTTTctg AAAGGAAA m8a Disrupted HPKMA_6422_G7461.1_76212773
hsa-miR-651-3p gcgcTTTCCTTTctg AAAGGAAA m8a Disrupted HPKMA_6422_G7461.1_76212773
hsa-miR-651-3p gcgcTTTCCTTTctg AAAGGAAA m8a Disrupted HPKMA_6422_G7461.1_76212773
Mutation Mutation ID Sample Name Cancer Type
chr17:g.78216688C>T COSM1386410 TCGA-AA-3950-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Mutation Mutation ID Sample Name Cancer Type
chr17:g.78216688C>A COSM3672598 TCGA-EJ-7125-01 [prostate][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Mutation Mutation ID Sample Name Cancer Type
chr17:g.78216686T>C COSM1386409 TCGA-AZ-6606-01 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr17:g.78216685G>C COSM3522792 TCGA-EB-A57M-01 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-766-5p agcaTTCCTCCggtt AGGAGGAA m7b Created HPKMA_6422_G7461.1_76212773
hsa-miR-766-5p agcaTTCCTCCggtt AGGAGGAA m7b Created HPKMA_6422_G7461.1_76212773
hsa-miR-766-5p agcaTTCCTCCggtt AGGAGGAA m7b Created HPKMA_6422_G7461.1_76212773

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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