SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001166373
Gene Symbol: MARCH1

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr4:g.163932932A>G COSN1290824 HX10T [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6830-3p gatcAAAGACAaatg UGUCUUUC m7a Created HPSD3_7530_G10112.1_164854086
hsa-miR-511-5p gatcAAAGACAaatg GUGUCUUU m7b Created HPSD3_7530_G10112.1_164854086

Mutation Mutation ID Sample Name Cancer Type
chr4:g.163524820A>T COSN2003888 RK032_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-569 tgCATTAACaattta AGUUAAUG m7b (m7b->m6b) HPSD3_7769_G10431.1_164445980
hsa-miR-3161 tgcaTTATCAattta CUGAUAAG m6b Created HPSD3_7769_G10431.1_164445980
hsa-miR-2053 tgcATTAACAattta GUGUUAAU m7b Disrupted HPSD3_7769_G10431.1_164445980
hsa-miR-569 tgCATTAACaattta AGUUAAUG m7b (m7b->m6b) HPSD3_7769_G10431.1_164445980
hsa-miR-3161 tgcaTTATCAattta CUGAUAAG m6b Created HPSD3_7769_G10431.1_164445980
hsa-miR-2053 tgcATTAACAattta GUGUUAAU m7b Disrupted HPSD3_7769_G10431.1_164445980

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser