SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001164145
Gene Symbol: CHAMP1

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr13:g.114324602C>T COSM223668 ME009T [skin][trunk][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6780b-5p tgCTTCCCCAgaacc UGGGGAAG m8a Disrupted HPKMA_4095_G4802.1_115090066
hsa-miR-6763-5p tgctTCCCCAGaacc CUGGGGAG m7a Disrupted HPKMA_4095_G4802.1_115090066
hsa-miR-637 tgcttCCCCAGaacc ACUGGGGG m6b Disrupted HPKMA_4095_G4802.1_115090066
hsa-miR-8089 tgctTCCCCAGaacc CCUGGGGA m7b Disrupted HPKMA_4095_G4802.1_115090066
hsa-miR-7162-3p tgcttCCTCAGAacc UCUGAGGU m7a Created HPKMA_4095_G4802.1_115090066
hsa-miR-7155-5p tgcttCCCCAGAacc UCUGGGGU m7a Disrupted HPKMA_4095_G4802.1_115090066
hsa-miR-6828-5p TGCTTCCTcagaacc AGGAAGCA m8a Created HPKMA_4095_G4802.1_115090066
hsa-miR-3915 tgcTTCCTCAgaacc UUGAGGAA m7b Created HPKMA_4095_G4802.1_115090066
hsa-miR-3150a-3p tgctTCCCCAGaacc CUGGGGAG m7a Disrupted HPKMA_4095_G4802.1_115090066
hsa-miR-2110 tgcTTCCCCAgaacc UUGGGGAA m7b Disrupted HPKMA_4095_G4802.1_115090066
hsa-miR-4725-3p tgCTTCCCCAgaacc UGGGGAAG m8a Disrupted HPKMA_4095_G4802.1_115090066
hsa-miR-4700-5p tgctTCCCCAGAacc UCUGGGGA m8a Disrupted HPKMA_4095_G4802.1_115090066
hsa-miR-4667-5p tgctTCCCCAGaacc ACUGGGGA m7b Disrupted HPKMA_4095_G4802.1_115090066
hsa-miR-4649-3p tgcttCCTCAGAacc UCUGAGGC m7a Created HPKMA_4095_G4802.1_115090066
hsa-miR-4314 tgcttcCCCAGAacc CUCUGGGA m6b Disrupted HPKMA_4095_G4802.1_115090066
hsa-miR-4271 tgCTTCCCCagaacc GGGGGAAG m7b (m7b->m6b) HPKMA_4095_G4802.1_115090066
hsa-miR-3928-3p tgcTTCCTCagaacc GGAGGAAC m6b Created HPKMA_4095_G4802.1_115090066

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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