SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001159936
Gene Symbol: EBNA1BP2

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr1:g.43164388A>T COSN1446023 RK167_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-539-5p caATTTCTCgacaca GGAGAAAU m7b (m6b->m7b) HPKMB_607_G684.1_43630059

Mutation Mutation ID Sample Name Cancer Type
chr1:g.43164380C>T COSN508027
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-520g-3p cgacaCACTTTGatc ACAAAGUG m7b Disrupted HPKMB_607_G684.1_43630059
hsa-miR-520h cgacaCACTTTGatc ACAAAGUG m7b Disrupted HPKMB_607_G684.1_43630059
hsa-miR-595 cgaCACACTTtgatc GAAGUGUG m7b Disrupted HPKMB_607_G684.1_43630059
hsa-miR-93-5p cgacaCACTTTGatc CAAAGUGC m7a Disrupted HPKMB_607_G684.1_43630059
hsa-miR-17-5p cgacaCACTTTGatc CAAAGUGC m7a Disrupted HPKMB_607_G684.1_43630059
hsa-miR-20b-5p cgacaCACTTTGatc CAAAGUGC m7a Disrupted HPKMB_607_G684.1_43630059
hsa-miR-3609 cgacaCACTTTGatc CAAAGUGA m7a Disrupted HPKMB_607_G684.1_43630059
hsa-miR-3973 cgacacACTTTGatc ACAAAGUA m6b Disrupted HPKMB_607_G684.1_43630059
hsa-miR-4698 cgacaCATTTTGAtc UCAAAAUG m8a Created HPKMB_607_G684.1_43630059
hsa-miR-519d-3p cgacaCACTTTGatc CAAAGUGC m7a Disrupted HPKMB_607_G684.1_43630059

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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