SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: NM_001153446
Gene Symbol: SCOC

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr4:g.140381103A>G COSM1137138 TCGA-B8-4151-01 [kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-188-5p agaaagtAAGGGATt CAUCCCUU m7b Disrupted HHHNH_3298_SCOC|NM_001153552|exon_utr3|-5.3794022828005|0.604796580202589
hsa-miR-6866-3p agaaagtAAGGGATt GAUCCCUU m7b Disrupted HHHNH_3298_SCOC|NM_001153552|exon_utr3|-5.3794022828005|0.604796580202589
hsa-miR-188-5p agaaagtAAGGGATt CAUCCCUU m7b Disrupted HHHNH_3298_SCOC|NM_001153552|exon_utr3|-5.3794022828005|0.604796580202589
hsa-miR-6866-3p agaaagtAAGGGATt GAUCCCUU m7b Disrupted HHHNH_3298_SCOC|NM_001153552|exon_utr3|-5.3794022828005|0.604796580202589

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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