SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001152
Gene Symbol: SLC25A5
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chrX:g.119469816C>T COSM2723487 SNUH_G15_S1 [haematopoietic_and_lymphoid_tissue][NS][haematopoietic_neoplasm][acute_myeloid_leukaemia]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4670-3p tTAACTTCgccttca UGAAGUUA m7b Disrupted HPSD3_10681_G14522.1_118603778
hsa-miR-524-3p ttaacttCGCCTTCa GAAGGCGC m7a Disrupted HPSD3_10681_G14522.1_118603778
hsa-miR-525-3p ttaacttCGCCTTCa GAAGGCGC m7a Disrupted HPSD3_10681_G14522.1_118603778
hsa-miR-548at-5p tTAACTTTgccttca AAAAGUUA m7b Created HPSD3_10681_G14522.1_118603778
hsa-miR-605-3p ttaacttTGCCTTCa AGAAGGCA m7b Created HPSD3_10681_G14522.1_118603778
hsa-miR-3714 ttaacttTGCCTTCa GAAGGCAG m7a Created HPSD3_10681_G14522.1_118603778

Mutation Mutation ID Sample Name Cancer Type
chrX:g.119469810T>C COSM4156553 S01742 [lung][NS][carcinoid-endocrine_tumour][typical]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4670-3p aggctctTAACTTCg UGAAGUUA m7b Disrupted HPSD3_10681_G14522.1_118603778

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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