SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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Transcript ID: | NM_001145417 |
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Gene Symbol: | MSL2 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr3:g.136152570A>C | COSM204725 | TCGA-AA-3977-01 | [large_intestine][colon][carcinoma][adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-129-5p | tgctaCAAAAAacta | CUUUUUGC | m6b | Disrupted | HPRO8_10485_G13964.1_135871405 |
hsa-miR-19a-5p | tgctacaCAAAACTa | AGUUUUGC | m7a | Created | HPRO8_10485_G13964.1_135871405 |
hsa-miR-19b-1-5p | tgctacaCAAAACTa | AGUUUUGC | m7a | Created | HPRO8_10485_G13964.1_135871405 |
hsa-miR-19b-2-5p | tgctacaCAAAACTa | AGUUUUGC | m7a | Created | HPRO8_10485_G13964.1_135871405 |
hsa-miR-2113 | tgctaCACAAAacta | AUUUGUGC | m6b | Created | HPRO8_10485_G13964.1_135871405 |
hsa-miR-3674 | tgCTACAAaaaacta | AUUGUAGA | m6b | Disrupted | HPRO8_10485_G13964.1_135871405 |
hsa-miR-5010-3p | tgctACACAAAActa | UUUUGUGU | m8a | Created | HPRO8_10485_G13964.1_135871405 |
hsa-miR-599 | tgctACACAAaacta | GUUGUGUC | m6b | Created | HPRO8_10485_G13964.1_135871405 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr3:g.136152559G>T | COSM1616959 | HCC108 | [liver][NS][carcinoma][NS] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-4661-5p | actatGCTAGTatat | AACUAGCU | m6b | Created | HPRO8_10485_G13964.1_135871405 |
hsa-miR-6814-3p | actATGCGAGTatat | ACUCGCAU | m8a | Disrupted | HPRO8_10485_G13964.1_135871405 |
hsa-miR-6872-5p | actATGCGAGtatat | UCUCGCAU | m7b | Disrupted | HPRO8_10485_G13964.1_135871405 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr3:g.136152559G>A | COSM1038847 | TCGA-AP-A0LM-01 | [endometrium][NS][carcinoma][endometrioid_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-153-3p | aCTATGCAAgtatat | UUGCAUAG | m8a | (m7a->m8a) | HPRO8_10485_G13964.1_135871405 |
hsa-miR-6814-3p | actATGCGAGTatat | ACUCGCAU | m8a | Disrupted | HPRO8_10485_G13964.1_135871405 |
hsa-miR-6872-5p | actATGCGAGtatat | UCUCGCAU | m7b | Disrupted | HPRO8_10485_G13964.1_135871405 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr3:g.136151624T>C | COSM3380412 | PCSI_0052_Pa_X | [pancreas][NS][carcinoma][NS] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-3167 | aGAAATCCcactcta | AGGAUUUC | m7b | Created | HPRO8_10484_G13962.1_135870467 |
hsa-miR-4481 | agaaatCCCACTCta | GGAGUGGG | m7b | Created | HPRO8_10484_G13962.1_135870467 |
hsa-miR-4654 | agaaATCCCACtcta | UGUGGGAU | m7b | Created | HPRO8_10484_G13962.1_135870467 |
hsa-miR-4745-5p | agaaatCCCACTCta | UGAGUGGG | m7b | Created | HPRO8_10484_G13962.1_135870467 |
hsa-miR-4769-5p | agaaATCCCACtcta | GGUGGGAU | m7b | Created | HPRO8_10484_G13962.1_135870467 |
hsa-miR-5089-5p | agaAATCCCACtcta | GUGGGAUU | m8a | Created | HPRO8_10484_G13962.1_135870467 |
hsa-miR-5186 | agaAATCTCactcta | AGAGAUUG | m6b | Disrupted | HPRO8_10484_G13962.1_135870467 |
hsa-miR-5586-3p | agaaatcTCACTCTa | CAGAGUGA | m7b | Disrupted | HPRO8_10484_G13962.1_135870467 |
hsa-miR-876-5p | aGAAATCCcactcta | UGGAUUUC | m7b | Created | HPRO8_10484_G13962.1_135870467 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr3:g.136151604G>T | COSM1038840 | TCGA-AX-A05Z-01 | [endometrium][NS][carcinoma][endometrioid_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-193a-3p | aaGCCAGTTattctt | AACUGGCC | m7a | (m6a->m7a) | HPRO8_10484_G13962.1_135870467 |
hsa-miR-193b-3p | aaGCCAGTTattctt | AACUGGCC | m7a | (m6a->m7a) | HPRO8_10484_G13962.1_135870467 |
hsa-miR-221-5p | aaGCCAGGTattctt | ACCUGGCA | m7a | (m7a->m6a) | HPRO8_10484_G13962.1_135870467 |
hsa-miR-619-3p | aagCCAGGTattctt | GACCUGGA | m6b | Disrupted | HPRO8_10484_G13962.1_135870467 |
hsa-miR-8073 | aaGCCAGGTattctt | ACCUGGCA | m7a | (m7a->m6a) | HPRO8_10484_G13962.1_135870467 |
hsa-miR-892b | aAGCCAGTtattctt | CACUGGCU | m7b | Created | HPRO8_10484_G13962.1_135870467 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr3:g.136151565C>A | COSM266959 | TCGA-AA-3672-01 | [large_intestine][colon][carcinoma][adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr3:g.136151559A>G | COSM1038839 | TCGA-AX-A0J0-01 | [endometrium][NS][carcinoma][endometrioid_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-1272 | cctagTCATCATttt | GAUGAUGA | m7b | Disrupted | HPRO8_10483_G13961.1_135870383 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr3:g.136151291C>T | COSM3123220 | 8066067 | [pancreas][NS][carcinoma][NS] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-130a-5p | gcattAATGTGActa | UUCACAUU | m7b | Created | HPRO8_10482_G13960.1_135870142 |
hsa-miR-23a-3p | gcattAATGTGActa | AUCACAUU | m7b | Created | HPRO8_10482_G13960.1_135870142 |
hsa-miR-23b-3p | gcattAATGTGActa | AUCACAUU | m7b | Created | HPRO8_10482_G13960.1_135870142 |
hsa-miR-23c | gcattAATGTGActa | AUCACAUU | m7b | Created | HPRO8_10482_G13960.1_135870142 |
hsa-miR-323a-3p | gcatTAATGTGacta | CACAUUAC | m7a | Created | HPRO8_10482_G13960.1_135870142 |
hsa-miR-569 | gCATTAACgtgacta | AGUUAAUG | m7b | Disrupted | HPRO8_10482_G13960.1_135870142 |