SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001145373
Gene Symbol: OTUD1
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr10:g.23441237T>TT COSN5275456 TCGA-CK-5916-01 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-548c-3p cacaacATTTTTaaa CAAAAAUC m6b Disrupted HPHES_966_G1273.1_23730151
hsa-miR-409-3p caCAACATTtttaaa GAAUGUUG m7b (m7b->m6b) HPHES_966_G1273.1_23730151

Mutation Mutation ID Sample Name Cancer Type
chr10:g.23441236A>AT COSN5275455 TCGA-CK-5916-01 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-548c-3p gcacaacATTTTTaa CAAAAAUC m6b Disrupted HPHES_966_G1273.1_23730151
hsa-miR-409-3p gcaCAACATTtttaa GAAUGUUG m7b Disrupted HPHES_966_G1273.1_23730151

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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