SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001145250
Gene Symbol: SP9

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr2:g.174336571C>G COSM3749607 TCGA-AF-6136-01 [large_intestine][rectum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6828-5p agtcggGCTTCCatt AGGAAGCA m6b Disrupted HPTK7_4324_G6295.1_175201294
hsa-miR-671-5p agtcgGGCTTCCatt AGGAAGCC m7b Disrupted HPTK7_4324_G6295.1_175201294
hsa-miR-6079 agtcggGCTTCCAtt UUGGAAGC m7b Disrupted HPTK7_4324_G6295.1_175201294
hsa-miR-6828-5p agtcggGCTTCCatt AGGAAGCA m6b Disrupted HPTK7_4324_G6295.1_175201294
hsa-miR-671-5p agtcgGGCTTCCatt AGGAAGCC m7b Disrupted HPTK7_4324_G6295.1_175201294
hsa-miR-6079 agtcggGCTTCCAtt UUGGAAGC m7b Disrupted HPTK7_4324_G6295.1_175201294

Mutation Mutation ID Sample Name Cancer Type
chr2:g.174336565G>T COSM4638284 HT115 [large_intestine][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-219a-2-3p ggtACAATTCgggct AGAAUUGU m7b Created HPTK7_4324_G6295.1_175201294
hsa-miR-219a-2-3p ggtACAATTCgggct AGAAUUGU m7b Created HPTK7_4324_G6295.1_175201294

Mutation Mutation ID Sample Name Cancer Type
chr2:g.174336561A>G COSM1227207 587278 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-500a-3p tcctGGTGCAagtcg AUGCACCU m6b Created HPTK7_4324_G6295.1_175201294
hsa-miR-4733-3p tCCTGGTGcaagtcg CCACCAGG m7b Created HPTK7_4324_G6295.1_175201294
hsa-miR-767-5p tccTGGTGCAagtcg UGCACCAU m7a Created HPTK7_4324_G6295.1_175201294

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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