SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001145153
Gene Symbol: TMEM71

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr8:g.132714589G>A COSN15118420 LP6005690-DNA_C02 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-376a-2-5p gttttacAATCTACa GGUAGAUU m7b Created HPTA2_1873_G5436.1_133726841
hsa-miR-4445-5p gttttACAATCTaca AGAUUGUU m7a Created HPTA2_1873_G5436.1_133726841
hsa-miR-508-3p gtttTACAATCtaca UGAUUGUA m7b Created HPTA2_1873_G5436.1_133726841
hsa-miR-376a-5p gttttacAATCTACa GUAGAUUC m7a Created HPTA2_1873_G5436.1_133726841

Mutation Mutation ID Sample Name Cancer Type
chr8:g.132714586C>T COSN15395516 AOCS-092-1-6 [ovary][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4495 ttacgaTTTACATTt AAUGUAAA m8a Created HPTA2_1873_G5436.1_133726841
hsa-miR-376a-2-5p ttacgATCTACattt GGUAGAUU m6b Disrupted HPTA2_1873_G5436.1_133726841
hsa-miR-4495 ttacgaTTTACATTt AAUGUAAA m8a Created HPTA2_1873_G5436.1_133726841
hsa-miR-3668 ttacgaTCTACATTt AAUGUAGA m8a Disrupted HPTA2_1873_G5436.1_133726841
hsa-miR-376a-2-5p ttacgATCTACattt GGUAGAUU m6b Disrupted HPTA2_1873_G5436.1_133726841
hsa-miR-3668 ttacgaTCTACATTt AAUGUAGA m8a Disrupted HPTA2_1873_G5436.1_133726841

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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