SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001143887
Gene Symbol: COPS2

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr15:g.49144986G>A COSM243815 PR-09-5630 [prostate][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-155-5p caaaagcAGCATTAa UUAAUGCU m7b Created HPTA1_4131_G5809.1_49437193
hsa-miR-365a-3p caaaagcGGCATTAa UAAUGCCC m7a Disrupted HPTA1_4131_G5809.1_49437193
hsa-miR-365b-3p caaaagcGGCATTAa UAAUGCCC m7a Disrupted HPTA1_4131_G5809.1_49437193
hsa-miR-6743-3p caaaAGCGGCattaa AGCCGCUC m6b Disrupted HPTA1_4131_G5809.1_49437193

Mutation Mutation ID Sample Name Cancer Type
chr15:g.49144981T>C COSM3501874 TCGA-DA-A1I4-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-365b-3p gcGGCATTAagcagt UAAUGCCC m7a (m7a->m6a) HPTA1_4131_G5809.1_49437193
hsa-miR-365a-3p gcGGCATTAagcagt UAAUGCCC m7a (m7a->m6a) HPTA1_4131_G5809.1_49437193
hsa-miR-1273e gcggcaTCAAGCAgt UUGCUUGA m7b Created HPTA1_4131_G5809.1_49437193

Mutation Mutation ID Sample Name Cancer Type
chr15:g.49127567A>T COSN8745829 AOCS-139-12-5 [ovary][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4722-5p acaaataTCCTGCaa GGCAGGAG m6b Created HPTA1_4130_G5808.1_49419767
hsa-miR-1286 acaaataTCCTGCAa UGCAGGAC m7a Created HPTA1_4130_G5808.1_49419767
hsa-miR-154-5p acaaATAACCTgcaa UAGGUUAU m7b Disrupted HPTA1_4130_G5808.1_49419767
hsa-miR-3145-3p acAAATATCctgcaa AGAUAUUU m7b (m6b->m7b) HPTA1_4130_G5808.1_49419767
hsa-miR-3665 acaaataACCTGCaa AGCAGGUG m6b Disrupted HPTA1_4130_G5808.1_49419767
hsa-miR-657 acaaatAACCTGCaa GGCAGGUU m7b Disrupted HPTA1_4130_G5808.1_49419767

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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