| SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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| Transcript ID: | NM_001142548 |
|---|---|
| Gene Symbol: | RAD54L |
| Browse Pathways | |
| Mutation | Mutation ID | Sample Name | Cancer Type | ||
|---|---|---|---|---|---|
| chr1:g.46278281G>T | COSM1602492 | HCC21 | [liver][NS][carcinoma][NS] | ||
| miRNA Targets Table | |||||
| miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
| hsa-miR-7846-3p | CTCCGCTGataacca | CAGCGGAG | m8a | Disrupted | HHHNH_3014_RAD54L|NM_003579|exon_utr3|-6.28196723969192|-0.211086040064102 |
| hsa-miR-374a-3p | ctccgCTGATAAcca | CUUAUCAG | m7b | Disrupted | HHHNH_3014_RAD54L|NM_003579|exon_utr3|-6.28196723969192|-0.211086040064102 |
| hsa-miR-3617-3p | ctccGCTGATaacca | CAUCAGCA | m6b | Disrupted | HHHNH_3014_RAD54L|NM_003579|exon_utr3|-6.28196723969192|-0.211086040064102 |
| Mutation | Mutation ID | Sample Name | Cancer Type | ||
|---|---|---|---|---|---|
| chr1:g.46278189TG>T | COSM4615095 | RW7213 | [large_intestine][NS][carcinoma][adenocarcinoma] | ||
| miRNA Targets Table | |||||
| miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
| hsa-miR-6870-3p | tccgGGATGAGgtact | GCUCAUCC | m7b | Disrupted | HHHNH_3013_RAD54L|NM_003579|exon_CDS|-6.44167399136012|-0.255343953144381 |
| hsa-miR-4777-3p | tccgggaTGAGGTAct | AUACCUCA | m7b | Disrupted | HHHNH_3013_RAD54L|NM_003579|exon_CDS|-6.44167399136012|-0.255343953144381 |
| hsa-miR-6072 | tccggGATGAGGtact | UCCUCAUC | m7b | Disrupted | HHHNH_3013_RAD54L|NM_003579|exon_CDS|-6.44167399136012|-0.255343953144381 |
| hsa-miR-6891-3p | tccggGATGAGGtact | CCCUCAUC | m7b | Disrupted | HHHNH_3013_RAD54L|NM_003579|exon_CDS|-6.44167399136012|-0.255343953144381 |
| Mutation | Mutation ID | Sample Name | Cancer Type | ||
|---|---|---|---|---|---|
| chr1:g.46278185G>A | COSM314662 | 587342 | [large_intestine][colon][carcinoma][adenocarcinoma] | ||
| miRNA Targets Table | |||||
| miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
| hsa-miR-3690 | gggcTCCAGGatgag | ACCUGGAC | m6b | Created | HHHNH_3013_RAD54L|NM_003579|exon_CDS|-6.44167399136012|-0.255343953144381 |
| hsa-miR-4254 | gggCTCCAGGatgag | GCCUGGAG | m7b | Created | HHHNH_3013_RAD54L|NM_003579|exon_CDS|-6.44167399136012|-0.255343953144381 |
| hsa-miR-1203 | ggGCTCCGGGatgag | CCCGGAGC | m8a | Disrupted | HHHNH_3013_RAD54L|NM_003579|exon_CDS|-6.44167399136012|-0.255343953144381 |
| hsa-miR-4793-5p | gggctcCAGGATGag | ACAUCCUG | m7b | Created | HHHNH_3013_RAD54L|NM_003579|exon_CDS|-6.44167399136012|-0.255343953144381 |