SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001142308
Gene Symbol: MALRD1

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr10:g.19633704G>A COSN8921212 SS6003314 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6840-3p ctTCCTGGGaatacc GCCCAGGA m7b (m7b->m6b) HPHES_1142_G1522.1_19922630
hsa-miR-6764-5p cttCCTGGGAatacc UCCCAGGG m7a Disrupted HPHES_1142_G1522.1_19922630
hsa-miR-630 cttcctgAGAATACc AGUAUUCU m7b Created HPHES_1142_G1522.1_19922630
hsa-miR-1266-5p cttCCTGAGaatacc CCUCAGGG m6b Created HPHES_1142_G1522.1_19922630
hsa-miR-4726-3p cttCCTGGGaatacc ACCCAGGU m6b Disrupted HPHES_1142_G1522.1_19922630
hsa-miR-4518 cttCCTGAGaatacc GCUCAGGG m6b Created HPHES_1142_G1522.1_19922630
hsa-miR-3938 cttcctGGGAATacc AAUUCCCU m6b Disrupted HPHES_1142_G1522.1_19922630
hsa-miR-3664-3p ctTCCTGAGAatacc UCUCAGGA m8a Created HPHES_1142_G1522.1_19922630
hsa-miR-1915-3p cttCCTGGGaatacc CCCCAGGG m6b Disrupted HPHES_1142_G1522.1_19922630

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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