SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001136474
Gene Symbol: VASH2

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr1:g.212988629C>T COSN5737296 HCC119T [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-2467-3p cttctCTCTGCactt AGCAGAGG m6b Disrupted HPHES_443_G594.1_213161972
hsa-miR-3919 cttcTCTCTGCactt GCAGAGAA m7a Disrupted HPHES_443_G594.1_213161972
hsa-miR-3678-3p cttctCTCTGCActt CUGCAGAG m7b Disrupted HPHES_443_G594.1_213161972
hsa-miR-3666 cttctctTTGCACTt CAGUGCAA m7b Created HPHES_443_G594.1_213161972
hsa-miR-301b-3p cttctctTTGCACTt CAGUGCAA m7b Created HPHES_443_G594.1_213161972
hsa-miR-301a-3p cttctctTTGCACTt CAGUGCAA m7b Created HPHES_443_G594.1_213161972
hsa-miR-19b-3p cttctcTTTGCACtt UGUGCAAA m7b Created HPHES_443_G594.1_213161972
hsa-miR-19a-3p cttctcTTTGCACtt UGUGCAAA m7b Created HPHES_443_G594.1_213161972
hsa-miR-130b-3p cttctctTTGCACTt CAGUGCAA m7b Created HPHES_443_G594.1_213161972
hsa-miR-130a-3p cttctctTTGCACTt CAGUGCAA m7b Created HPHES_443_G594.1_213161972
hsa-miR-527 cttctCTTTGCActt CUGCAAAG m7b Created HPHES_443_G594.1_213161972
hsa-miR-518a-5p cttctCTTTGCActt CUGCAAAG m7b Created HPHES_443_G594.1_213161972
hsa-miR-454-3p cttctctTTGCACTt UAGUGCAA m7b Created HPHES_443_G594.1_213161972
hsa-miR-4311 ctTCTCTTTgcactt GAAAGAGA m7b (m6b->m7b) HPHES_443_G594.1_213161972
hsa-miR-4295 cttctctTTGCACTt CAGUGCAA m7b Created HPHES_443_G594.1_213161972
hsa-miR-2467-3p cttctCTCTGCactt AGCAGAGG m6b Disrupted HPHES_443_G594.1_213161972
hsa-miR-3919 cttcTCTCTGCactt GCAGAGAA m7a Disrupted HPHES_443_G594.1_213161972
hsa-miR-3678-3p cttctCTCTGCActt CUGCAGAG m7b Disrupted HPHES_443_G594.1_213161972
hsa-miR-3666 cttctctTTGCACTt CAGUGCAA m7b Created HPHES_443_G594.1_213161972
hsa-miR-301b-3p cttctctTTGCACTt CAGUGCAA m7b Created HPHES_443_G594.1_213161972
hsa-miR-301a-3p cttctctTTGCACTt CAGUGCAA m7b Created HPHES_443_G594.1_213161972
hsa-miR-19b-3p cttctcTTTGCACtt UGUGCAAA m7b Created HPHES_443_G594.1_213161972
hsa-miR-19a-3p cttctcTTTGCACtt UGUGCAAA m7b Created HPHES_443_G594.1_213161972
hsa-miR-130b-3p cttctctTTGCACTt CAGUGCAA m7b Created HPHES_443_G594.1_213161972
hsa-miR-130a-3p cttctctTTGCACTt CAGUGCAA m7b Created HPHES_443_G594.1_213161972
hsa-miR-527 cttctCTTTGCActt CUGCAAAG m7b Created HPHES_443_G594.1_213161972
hsa-miR-518a-5p cttctCTTTGCActt CUGCAAAG m7b Created HPHES_443_G594.1_213161972
hsa-miR-454-3p cttctctTTGCACTt UAGUGCAA m7b Created HPHES_443_G594.1_213161972
hsa-miR-4311 ctTCTCTTTgcactt GAAAGAGA m7b (m6b->m7b) HPHES_443_G594.1_213161972
hsa-miR-4295 cttctctTTGCACTt CAGUGCAA m7b Created HPHES_443_G594.1_213161972

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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